Gene omics information

Query gene ID At5g16950
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.168.8At5g16950831558unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.4457.2At2g27470817292NF-YB11 (NUCLEAR FACTOR Y, SUBUNIT B11)F:transcription factor activity;P:regulation of transcription;C:intracellular;OMFBPVAS.X.H.G.
0.4050.8At3g17160820973unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPVAS.X.H.G.
0.4050.8At5g60030836125unknown proteinF:unknown;P:unknown;C:unknown;MOFBPVAS.X.H.G.
0.2420.7At1g15940838164bindingF:binding;P:biological_process unknown;C:unknown;MOBFPVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
218.3100.0GSM311281Laser capture microdissected (LCM) chalazal seed coat at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
182.9100.0GSM284385Arabidopsis GEP6GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
180.0100.0GSM284395Arabidopsis GPSc1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
175.4100.0GSM284384Arabidopsis GEP5GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
165.8100.0GSM311273Laser capture microdissected (LCM) embryo proper at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
157.799.9GSM311292Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
154.799.9GSM284396Arabidopsis GPSc2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
139.099.9GSM311288Laser capture microdissected (LCM) embryo proper at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
127.999.9GSM284391Arabidopsis GPE3GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
120.599.9GSM311274Laser capture microdissected (LCM) embryo proper at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.029e-340At5g02950831728PWWP domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBVC.G.S.X.
0.069e-340At4g30460829169glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBOPFVAC.G.S.X.
0.021e-136At3g212955008017-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBMPFC.G.S.X.
0.021e-136At3g01300820989protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.031e-136At1g24430839059transferase/ transferase, transferring acyl groups other than amino-acyl groupsF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:N-terminal protein myristoylation;C:cellular_component unknown;PFC.G.S.X.
0.021e-136At1g29320839806transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MOFBPVAC.G.S.X.
0.036e-134At5g57120835816-F:molecular_function unknown;P:biological_process unknown;C:nucleolus;MOBFPVAC.G.S.X.
0.016e-134At5g58120835924disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAC.G.S.X.
0.026e-134At3g03130821080unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMFPVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.082e-136Glycine maxGmaAffx.30443.1.S1_atAW706358--3e-1At5g16950unknown proteinC.G.S.X.
0.044e+030Hordeum vulgareHVSMEc0005E20f_atHVSMEc0005E20f--8e-174Atmg00520-C.G.S.X.
0.051e+034Oryza sativaOs09g04847009637.m02754--1e+0At5g16950unknown proteinC.G.S.X.
0.082e-136Populus trichocarpaPtpAffx.209001.1.S1_atpmrna17838hypothetical protein-7e-2At5g16950unknown proteinC.G.S.X.
0.066e-134Triticum aestivumTa.18802.1.S1_atCA642346--2e+0At4g00165protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.064e-236Vitis vinifera1620242_atBM437361--2e-1At5g16950unknown proteinC.G.S.X.
0.034e+030Zea maysZm.6498.1.A1_atAI691894--3e-4At1g10050glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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