Gene omics information

Query gene ID At5g16920
Gene name -
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2830.3At5g16920831555-F:molecular_function unknown;P:unknown;C:endomembrane system;POS.X.H.G.
0.4457.2At2g42940818895DNA-binding family proteinF:DNA binding;P:biological_process unknown;C:chloroplast;PBOS.X.H.G.
0.4253.9At4g29980829121unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.3643.6At3g52130824377protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PS.X.H.G.
0.3541.6At3g23770821959glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFOS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
132.299.9GSM62694Columbia flowers_stage 1-10GSE2848Auxin Response Factor mediated flower gene expression
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.011e-138At2g26890817230GRV2 (GRAVITROPISM DEFECTIVE 2)GRV2 has sequence similarity to the C. elegans protein RME-8 which is involved in endocytosis. grv2 mutants result in a reduction in gravitropic response in hypocotyls and shoots but do not affect root gravitropism. The mutants are defective in amyloplast sedimentation.C.G.S.X.
0.014e-136At1g31690840056amine oxidase/ copper ion binding / quinone bindingF:quinone binding, amine oxidase activity, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBMOPAC.G.S.X.
0.012e+034At5g33280833300chloride channel-like (CLC) protein, putativeF:anion channel activity, voltage-gated chloride channel activity;P:chloride transport;C:intracellular, membrane;BMOFPAC.G.S.X.
0.012e+034At5g42590834266CYP71A16putative cytochrome P450C.G.S.X.
0.012e+034At2g07560815329AHA6 (Arabidopsis H(+)-ATPase 6)F:ATPase activity;P:cation transport, metabolic process, ATP biosynthetic process;C:plasma membrane, membrane;BMOFPAVC.G.S.X.
0.022e+034At2g28200817366nucleic acid binding / transcription factor/ zinc ion bindingF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;MPOFC.G.S.X.
0.022e+034At1g12420837798ACR8F:amino acid binding;P:response to abscisic acid stimulus;C:cellular_component unknown;BOPC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Glycine maxGmaAffx.66263.1.S1_atBE659679--4e-1At5g16920-C.G.S.X.
0.023e+032Hordeum vulgareContig120_atContig120--2e+0At5g14740CA2 (CARBONIC ANHYDRASE 2)C.G.S.X.
0.031e+132Oryza sativaOs07g06134009635.m04224--4e+0At5g23750remorin family proteinC.G.S.X.
0.045e-136Populus trichocarpaPtpAffx.212193.1.S1_atpmrna23900hypothetical protein-2e-1At5g16920-C.G.S.X.
0.032e+034Triticum aestivumTaAffx.36593.1.S1_atBQ166396--1e+0At5g37780CAM1 (CALMODULIN 1)C.G.S.X.
0.037e-340Vitis vinifera1615797_atCF513517hypothetical protein LOC100256435-9e-27At5g41310kinesin motor protein-relatedC.G.S.X.
0.031e+130Zea maysZmAffx.300.1.A1_atAI670433--8e-1At2g44735-C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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