Gene omics information

Query gene ID At5g16460
Gene name -
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7385.5At5g16460831507-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOS.X.H.G.
0.9396.4At1g27990839692unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9296.0At1g02700839492unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PMFOS.X.H.G.
0.9296.0At2g19900816509ATNADP-ME1 (NADP-malic enzyme 1)The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME1 is expressed in response to developmental and cell-specific signals.S.X.H.G.
0.9195.6At4g27530828862unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9195.6At5g607608361972-phosphoglycerate kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPBAFVS.X.H.G.
0.9095.1At5g42290834234transcription activator-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.8894.0At5g45310834567unknown proteinF:unknown;P:unknown;C:endomembrane system;OMVBFPAS.X.H.G.
0.8793.5At3g22500821821ATECP31late embryogenesis abundant (LEA) proteinS.X.H.G.
0.8793.5At1g75490843885DNA binding / transcription factorencodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
954.6100.0GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
929.1100.0GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
307.7100.0GSM133117RIKEN-YAMAUCHI1AGSE5687AtGenExpress: Different temperature treatment of seeds
170.3100.0GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
160.099.9GSM131700ATGE_82_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
153.899.9GSM131707ATGE_84_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
146.099.9GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)
146.099.9GSM131703ATGE_83_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
143.899.9GSM131702ATGE_82_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
135.499.9GSM131705ATGE_83_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.024e-240At5g50150835080unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFBC.G.S.X.
0.014e-240At5g49110834970unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;BMOFPVC.G.S.X.
0.011e-138At5g57200835826epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedF:phospholipid binding, clathrin binding, binding, phosphatidylinositol binding;P:N-terminal protein myristoylation, clathrin coat assembly;C:clathrin coat;MOFVPBAC.G.S.X.
0.011e-138At2g24720817008ATGLR2.2member of Putative ligand-gated ion channel subunit familyC.G.S.X.
0.021e-138At1g73760843711zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:chloroplast;PMOFVBC.G.S.X.
0.015e-136At5g24880832557-F:unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.038e-136Glycine maxGma.4779.1.A1_atAW396769--4e-6At3g25190nodulin, putativeC.G.S.X.
0.021e+034Hordeum vulgareHD04M05u_atHD04M05u--5e+0At5g38650proteasome maturation factor UMP1 family proteinC.G.S.X.
0.031e+036Oryza sativaOsAffx.24869.1.S1_at---0C.G.S.X.
0.072e-138Populus trichocarpaPtpAffx.222619.1.S1_s_atpmrna40157hypothetical protein-6e-2At5g16460-C.G.S.X.
0.034e-240Triticum aestivumTaAffx.109241.1.S1_atCA678162--7e-2At5g17233unknown proteinC.G.S.X.
0.023e+032Vitis vinifera1622174_atCB912233hypothetical protein LOC100241032-5e+0At4g38090unknown proteinC.G.S.X.
0.034e+032Zea maysZmAffx.834.1.A1_atAI770566--8e-1At1g54420unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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