Gene omics information

Query gene ID At5g16340
Gene name AMP-binding protein, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.1811.4At5g16340831495AMP-binding protein, putativeF:catalytic activity;P:metabolic process;C:unknown;BOMFPAVS.X.H.G.
0.8693.1At3g45300823668IVD (ISOVALERYL-COA-DEHYDROGENASE)Encodes isovaleryl-coenzyme a dehydrogenase.S.X.H.G.
0.6781.6At1g03090838362MCCAMCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion.S.X.H.G.
0.5773.8At3g06850819869BCE2dihydrolipoamide branched chain acyltransferaseS.X.H.G.
0.5065.3At1g06570837168PDS1 (PHYTOENE DESATURATION 1)Mutation of the PDS1 locus disrupts the activity of p-hydroxyphenylpyruvate dioxygenase (HPPDase), the first committed step in the synthesis of both plastoquinone and tocopherols in plants.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
75.999.9GSM205159protoplast_KIN10_rep1GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cells
45.899.8GSM133400Knight_2-3_sfr6-lt_Rep1_ATH1GSE5710Dark-induced gene expression in sfr6
43.799.8Capper_1-7_D9_estradiol
39.199.8Capper_1-9_E6_estradiol
37.899.8Capper_1-11_E10_estradiol
35.999.7Capper_1-4_B8_water
33.599.7Capper_1-1_A3_estradiol
33.299.7Capper_1-10_E6_water
31.499.7GSM2531584h into an extended nightAGSE10016Expression data of Arabidopsis thaliana rosettes in an extended night
30.299.7E-TABM-63-raw-cel-681137195
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.9202393At5g16370831498AAE5 (ACYL ACTIVATING ENZYME 5)F:catalytic activity;P:metabolic process;C:peroxisome;BOMFPAVC.G.S.X.
0.720852At1g75960843929AMP-binding protein, putativeF:catalytic activity;P:metabolic process;C:unknown;BOMFPAVC.G.S.X.
0.112e-1067At1g21540838755AMP-binding protein, putativeF:catalytic activity;P:metabolic process;C:unknown;BOMFPAVC.G.S.X.
0.099e-1065At1g21530838754AMP-binding protein, putativeF:catalytic activity;P:metabolic process;C:unknown;BOMFPAVC.G.S.X.
0.031e-861At1g77240844060AMP-binding protein, putativeF:catalytic activity;P:metabolic process;C:unknown;BOMFPAVC.G.S.X.
0.049e-756At1g66120842926acyl-activating enzyme 11 (AAE11)F:catalytic activity;P:metabolic process;C:unknown;BOMFPAVC.G.S.X.
0.011e-242At3g02400821210forkhead-associated domain-containing protein / FHA domain-containing protein / AT hook motif-containing proteinF:DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;MOFBPVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.088e-859Glycine maxGma.4483.1.S1_atCF921631--1e-9At1g75960AMP-binding protein, putativeC.G.S.X.
0.013e-240Hordeum vulgareContig19697_atContig19697--2e+0At4g36930SPT (SPATULA)C.G.S.X.
0.051e-140Oryza sativaOs04g0674700BI812716-Amp-binding protein1e+0At3g18295unknown proteinC.G.S.X.
0.199e-1789Populus trichocarpaPtpAffx.225188.1.S1_atpmrna44342acyl:coa ligase acetate-coa synthetase-like protein-2e-14At1g21530AMP-binding protein, putativeC.G.S.X.
0.064e-344Triticum aestivumTa.13693.2.S1_atCA647974--1e-3At5g16340AMP-binding protein, putativeC.G.S.X.
0.073e-1065Vitis vinifera1622047_atCB968668hypothetical protein LOC100256407-3e-8At1g75960AMP-binding protein, putativeC.G.S.X.
0.011e+034Zea maysZm.10724.1.A1_atBQ539234hypothetical protein LOC100277790-5e+0At5g05830zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0008152The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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