Gene omics information

Query gene ID At5g15380
Gene name DRM1 (domains rearranged methylase 1)
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g15380831390DRM1 (domains rearranged methylase 1)Encodes methyltransferase involved in the de novo DNA methylation and maintenance of asymmetric methylation of DNA sequences.S.X.H.G.
0.7687.4At5g44850834515-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMBOS.X.H.G.
0.7586.9At4g17580827475Bax inhibitor-1 family protein / BI-1 family proteinF:molecular_function unknown;P:negative regulation of apoptosis, regulation of apoptosis, apoptosis;C:integral to membrane;BMOFPVS.X.H.G.
0.7184.2At5g62160836336AtZIP12 (ZINC TRANSPORTER 12 PRECURSOR)member of Fe(II) transporter isolog familyS.X.H.G.
0.6882.2At5g46310834674WRKY family transcription factorF:transcription factor activity;P:regulation of transcription, DNA-dependent;C:unknown;FPS.X.H.G.
0.6882.2At1g28220839716ATPUP3Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.S.X.H.G.
0.6781.6At2g33260817889tryptophan/tyrosine permease family proteinF:L-tyrosine transmembrane transporter activity;P:amino acid transport;C:membrane;BOPAMFS.X.H.G.
0.6579.6At1g49260841350-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.6478.9At5g48420834897unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
387.4100.0GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
226.5100.0GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
63.199.8GSM131106Broadley_1-4_A4-Bo-P3-phosphate-starved_Rep3_ATH1GSE5614Changes in Gene Expression in Brassica oleracea Shoots during Phosphate Starvation (Cross-species study)
60.099.8GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
58.099.8GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
54.399.8GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
51.899.8GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.172e-38161At5g14620831315DRM2 (DOMAINS REARRANGED METHYLTRANSFERASE 2)A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues.C.G.S.X.
0.012e-138At4g18820827616ATP binding / DNA binding / DNA-directed DNA polymerase/ nucleoside-triphosphatase/ nucleotide bindingF:nucleoside-triphosphatase activity, DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, ATP binding;P:DNA replication;C:plasma membrane;BOMFAPVC.G.S.X.
0.032e-138At1g22110838816structural constituent of ribosomeF:structural constituent of ribosome;P:translation;C:ribosome, intracellular, chloroplast;OMBFPVAC.G.S.X.
0.019e-136At4g26660828773-F:unknown;P:biological_process unknown;C:chloroplast;MOFBPAVC.G.S.X.
0.019e-136At4g14840827141unknown proteinF:unknown;P:unknown;C:cellular_component unknown;MOFBPAVC.G.S.X.
0.019e-136At3g60880825259dihydrodipicolinate synthase 1 (DHDPS1) (DHDPS) (DHPS1)Encodes a dihydropicolinate synthase involved in lysine biosynthesis. The enzyme is allosterically inhibited by lysine. It is predicted to localize to the cholorplast.C.G.S.X.
0.019e-136At3g46220823767unknown proteinF:unknown;P:biological_process unknown;C:unknown;MOFPBVAC.G.S.X.
0.019e-136At3g50690824233leucine-rich repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MOFBPVAC.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.011e+036Glycine maxGmaAffx.75782.1.S1_atBQ742018--1e-1At1g29000heavy-metal-associated domain-containing proteinC.G.S.X.
0.012e-344Hordeum vulgareContig13235_atContig13235--8e-25At1g80930MIF4G domain-containing protein / MA3 domain-containing proteinC.G.S.X.
0.015e-138Oryza sativaOs12g01985009640.m00905-Hypothetical protein2e+0At5g66658unknown proteinC.G.S.X.
0.051e-346Populus trichocarpaPtpAffx.200961.1.S1_atpmrna1881DNA methyltransferase-1e-2At5g14620DRM2 (DOMAINS REARRANGED METHYLTRANSFERASE 2)C.G.S.X.
0.024e+034Triticum aestivumTa.3692.1.A1_atBJ252550--5e+0At5g11770NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrialC.G.S.X.
0.021e+034Vitis vinifera1617122_s_atCB916811hypothetical protein LOC100258002-8e-11At2g38140PSRP4 (PLASTID-SPECIFIC RIBOSOMAL PROTEIN 4)C.G.S.X.
0.027e-342Zea maysZm.16258.1.A1_atCF245017hypothetical protein LOC100192479-8e-2At5g14620DRM2 (DOMAINS REARRANGED METHYLTRANSFERASE 2)C.G.S.X.
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Biological processes

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ECCGO IDProcess Name
XGO:0016458Any transcriptional or post-transcriptional process carried out at the cellular level that results in long-term gene inactivation.
XGO:0051567The modification of histone H3 by addition of a methyl group to lysine at position 9 of the histone.
XGO:0006306The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.
XGO:0006346Repression of transcription by methylation of DNA, leading to the formation of heterochromatin.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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