CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g15190

Gene name unknown protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.58 73.8 At5g15190 831371 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P S.X. H.G.
0.73 85.5 At3g13672 820573 seven in absentia (SINA) family protein F:molecular_function unknown;P:multicellular organismal development, ubiquitin-dependent protein catabolic process;C:nucleus;MPO S.X. H.G.
0.71 84.2 At1g56600 842114 AtGolS2 (Arabidopsis thaliana galactinol synthase 2) F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:cellular_component unknown;PMFVBO S.X. H.G.
0.70 83.5 At1g66390 842957 MYB90 (MYB DOMAIN PROTEIN 90) production of anthocyanin pigment 2 protein (PAP2) S.X. H.G.
0.58 73.8 At1g57590 842135 carboxylesterase F:carboxylesterase activity;P:biological_process unknown;C:unknown;PMOB S.X. H.G.
0.57 73.8 At1g07430 837255 protein phosphatase 2C, putative / PP2C, putative F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOFBV S.X. H.G.
0.57 73.8 At2g41190 818718 amino acid transporter family protein F:amino acid transmembrane transporter activity;P:amino acid transport;C:plasma membrane, membrane;MPOFBAV S.X. H.G.
0.36 43.6 At2g25625 817103 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
510.1 100.0 GSM269825 T8 leaf-drought-rep2 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
271.7 100.0 GSM269823 T6 leaf-drought-rep2 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
266.8 100.0 GSM269827 C2 leaf-drought-rep2 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
250.7 100.0 GSM269831 T6 leaf-drought-rep3 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
242.6 100.0 GSM269817 T8 leaf-drought-rep1 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
240.7 100.0 GSM269821 WT leaf-drought-rep2 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
188.7 100.0 GSM269819 C2 leaf-drought-rep1 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
161.6 99.9 GSM38670 DSNP GSE2268 Arabidopsis polysome microarray
156.3 99.9 GSM269829 WT leaf-drought-rep3 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
152.7 99.9 GSM269813 WT leaf-drought-rep1 GSE10670 Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.03 7e-1 34 At3g49660 824128 transducin family protein / WD-40 repeat family protein F:nucleotide binding;P:G-protein coupled receptor protein signaling pathway;C:chloroplast, heterotrimeric G-protein complex;MFOPBAV C.G. S.X.
0.01 7e-1 34 At2g25800 817122 - F:unknown;P:biological_process unknown;C:unknown;POMFB C.G. S.X.
0.01 3e+0 32 At5g58820 835999 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM C.G. S.X.
0.02 3e+0 32 At5g58930 836010 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POFM C.G. S.X.
0.02 3e+0 32 At5g49690 835032 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:transferase activity, transferring glycosyl groups;P:metabolic process;C:unknown;PMBOVF C.G. S.X.
0.01 3e+0 32 At5g06050 830492 dehydration-responsive protein-related F:unknown;P:biological_process unknown;C:endomembrane system;PBOM C.G. S.X.
0.02 3e+0 32 At5g44480 834475 DUR (DEFECTIVE UGE IN ROOT) mutant has Altered lateral root; UDP Glucose Epimerase C.G. S.X.
0.02 3e+0 32 At4g31970 829327 CYP82C2 member of CYP82C C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 2e-1 36 Glycine max GmaAffx.92205.1.S1_at CF807930 - - 3e-1 At5g15190 unknown protein C.G. S.X.
0.03 1e+0 32 Hordeum vulgare Contig24110_at Contig24110 - - 3e-1 Atmg00860 - C.G. S.X.
0.04 1e+0 34 Oryza sativa Os05g0132800 AK108629.1 - Conserved hypothetical protein 1e+0 At3g55790 unknown protein C.G. S.X.
0.04 9e-1 34 Populus trichocarpa PtpAffx.221819.1.S1_at pmrna38891 hypothetical protein - 1e-5 At5g14010 zinc finger (C2H2 type) family protein C.G. S.X.
0.05 3e+0 32 Triticum aestivum TaAffx.109830.1.S1_at CA668356 - - 4e+0 At5g15190 unknown protein C.G. S.X.
0.03 3e+0 30 Vitis vinifera 1607468_at CA809097 hypothetical protein LOC100261598 - 1e+0 At5g59160 TOPP2 C.G. S.X.
0.04 2e+1 28 Zea mays ZmAffx.406.5.A1_at AI670502 - - 2e-1 At2g41760 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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