CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g15130

Gene name WRKY72

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.57 73.8 At5g15130 831365 WRKY72 member of WRKY Transcription Factor; Group II-b S.X. H.G.
0.72 84.8 At1g31885 840079 transporter F:transporter activity;P:transport;C:integral to membrane, membrane;BPOMFAV S.X. H.G.
0.72 84.8 At1g78000 844135 SULTR1 Encodes a sulfate transporter that can restore sulfate uptake capacity of a yeast mutant lacking sulfate transporter genes. S.X. H.G.
0.71 84.2 At5g05400 830422 disease resistance protein (CC-NBS-LRR class), putative F:protein binding, ATP binding;P:N-terminal protein myristoylation, defense response, apoptosis;C:chloroplast;PMBOFA S.X. H.G.
0.69 82.9 At3g54040 824571 photoassimilate-responsive protein-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.68 82.2 At5g43520 834372 DC1 domain-containing protein F:unknown;P:unknown;C:unknown;POMF S.X. H.G.
0.66 80.1 At2g23030 816833 SNRK2.9 (SNF1-RELATED PROTEIN KINASE 2.9) encodes a member of SNF1-related protein kinases (SnRK2) S.X. H.G.
0.65 79.6 At1g07560 837270 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA S.X. H.G.
0.65 79.6 At2g28990 817448 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA S.X. H.G.
0.64 78.9 At3g24290 822017 AMT1 F:ammonium transmembrane transporter activity;P:ammonium transport, transport;C:endomembrane system, membrane;OBMFPA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
116.0 99.9 GSM184520 Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
101.1 99.9 GSM131273 AtGen_6-1421_Cold(4°C)-Roots-6.0h_Rep1 GSE5621 AtGenExpress: Stress Treatments (Cold stress)
92.9 99.9 GSM131318 AtGen_6-3322_Saltstress-Roots-3.0h_Rep2 GSE5623 AtGenExpress: Stress Treatments (Salt stress)
88.0 99.9 GSM184519 Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
58.9 99.8 GSM131274 AtGen_6-1422_Cold(4°C)-Roots-6.0h_Rep2 GSE5621 AtGenExpress: Stress Treatments (Cold stress)
58.5 99.8 GSM131269 AtGen_6-1321_Cold(4°C)-Roots-3.0h_Rep1 GSE5621 AtGenExpress: Stress Treatments (Cold stress)
52.8 99.8 GSM184516 Pericycle root cells 2hr continuous KCl and MSX control treated, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
51.3 99.8 E-MEXP-828-raw-cel-1156922634
46.8 99.8 E-MEXP-828-raw-cel-1156922386
45.3 99.8 E-MEXP-828-raw-cel-1156922342
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.18 3e-34 147 At1g18860 838467 WRKY61 member of WRKY Transcription Factor; Group II-b C.G. S.X.
0.11 7e-26 119 At1g68150 843143 WRKY9 member of WRKY Transcription Factor; Group II-b C.G. S.X.
0.04 9e-13 75 At1g62300 842527 WRKY6 transcription factor WRKY6 (WRKY6) C.G. S.X.
0.04 9e-10 65 At4g04450 825775 WRKY42 member of WRKY Transcription Factor; Group II-b C.G. S.X.
0.08 4e-9 63 At4g01720 828001 WRKY47 member of WRKY Transcription Factor; Group II-b C.G. S.X.
0.04 2e-7 57 At4g22070 828296 WRKY31 member of WRKY Transcription Factor; Group II-b C.G. S.X.
0.02 3e-6 54 At1g69810 843317 WRKY36 member of WRKY Transcription Factor; Group II-b C.G. S.X.
0.02 9e-4 46 At1g22230 838828 unknown protein F:unknown;P:unknown;C:chloroplast;MOFPVBA C.G. S.X.
0.01 3e-3 44 At1g16900 838261 sugar binding / transferase, transferring glycosyl groups curculin-like (mannose-binding) lectin family protein, very low similarity to Ser Thr protein kinase GI:2598067 from (Zea mays); contains Pfam lectin (probable mannose binding) domain PF01453 but not the protein kinase domain of the Z. mays protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 8e-8 59 Glycine max GmaAffx.83326.2.S1_at BU081884 WRKY34 protein - 2e-23 At4g22070 WRKY31 C.G. S.X.
0.02 4e-1 36 Hordeum vulgare HVSMEg0010P03r2_at HVSMEg0010P03r2 - - 2e-5 At1g20510 OPCL1 (OPC-8:0 COA LIGASE1) C.G. S.X.
0.13 8e-18 93 Oryza sativa Os06g0146250 9634.m00460 - - 5e-18 At5g15130 WRKY72 C.G. S.X.
0.13 2e-45 184 Populus trichocarpa PtpAffx.213917.1.S1_at pmrna27134 hypothetical protein - 2e-32 At1g18860 WRKY61 C.G. S.X.
0.02 4e-3 44 Triticum aestivum TaAffx.128418.81.S1_at BQ608123 - - 4e+0 At3g02980 GCN5-related N-acetyltransferase (GNAT) family protein C.G. S.X.
0.02 1e+0 34 Vitis vinifera 1621823_at CF214240 hypothetical protein LOC100253216 - 4e+0 At5g66000 unknown protein C.G. S.X.
0.02 1e+0 34 Zea mays ZmAffx.1196.1.A1_at BE025386 - - 2e-1 At5g49120 senescence-associated protein-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0006355 Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
L GO:0045449 Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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