Gene omics information

Query gene ID At5g14180
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4862.5At5g14180831268MPL1 (MYZUS PERSICAE-INDUCED LIPASE 1)F:catalytic activity;P:glycerol biosynthetic process, lipid metabolic process;C:endomembrane system;MFPBOS.X.H.G.
0.6579.6At1g48660841288auxin-responsive GH3 family proteinF:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;OPBMFS.X.H.G.
0.5368.6At4g24150828515AtGRF8 (GROWTH-REGULATING FACTOR 8)Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in shoot and flower.S.X.H.G.
0.5368.6At5g10120830876ethylene insensitive 3 family proteinF:transcription factor activity;P:regulation of transcription;C:nucleus;POMS.X.H.G.
0.4862.5At5g03860831690MLS (MALATE SYNTHASE)Encodes a protein with malate synthase activity.S.X.H.G.
0.4862.5At5g17490831615RGL3 (RGA-LIKE PROTEIN 3)DELLA subfamily member involved in GA signal transductionS.X.H.G.
0.4152.4At3g05190819683aminotransferase class IV family proteinF:catalytic activity;P:metabolic process;C:cellular_component unknown;OBPAFMS.X.H.G.
0.4152.4At5g14450831296GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:plant-type cell wall;PBFOMS.X.H.G.
0.4050.8At4g39500830104CYP96A11member of CYP96AS.X.H.G.
0.3846.7At1g75830843916LCR67Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
261.1100.0GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
207.0100.0GSM133117RIKEN-YAMAUCHI1AGSE5687AtGenExpress: Different temperature treatment of seeds
182.4100.0GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
169.7100.0GSM133309RIKEN-NAKABAYASHI4BGSE5700AtGenExpress: Effect of ABA during seed imbibition
129.399.9GSM133310RIKEN-NAKABAYASHI5BGSE5700AtGenExpress: Effect of ABA during seed imbibition
124.099.9GSM133308RIKEN-NAKABAYASHI4AGSE5700AtGenExpress: Effect of ABA during seed imbibition
123.399.9GSM133306RIKEN-NAKABAYASHI2BGSE5700AtGenExpress: Effect of ABA during seed imbibition
112.299.9GSM134300Penfield_1-2_endosperm-control_Rep2_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
109.999.9GSM134301Penfield_1-3_endosperm-control_Rep3_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
107.299.9GSM133307RIKEN-NAKABAYASHI3AGSE5700AtGenExpress: Effect of ABA during seed imbibition
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.026e-136At3g44510823576-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBC.G.S.X.
0.016e-136At2g29510817500unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFBVC.G.S.X.
0.013e+034At5g17420831608IRX3 (IRREGULAR XYLEM 3)Encodes a xylem-specific cellulose synthase that is phosphorylated on one or more serine residues (on either S185 or one of S180 or S181).C.G.S.X.
0.013e+034At4g15640827241unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PC.G.S.X.
0.023e+034At3g04200819575germin-like protein, putativeF:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PFOC.G.S.X.
0.013e+034At3g48470824006EMB2423 (EMBRYO DEFECTIVE 2423)F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;MFPOC.G.S.X.
0.013e+034At3g54990824664SMZ (SCHLAFMUTZE)Encodes a AP2 domain transcription factor that can repress flowering. SMZ and its paralogous gene, SNARCHZAPFEN (SNZ), share a signature with partial complementarity to the miR172 microRNA, whose precursor is induced upon flowering.C.G.S.X.
0.013e+034At2g31880817746leucine-rich repeat transmembrane protein kinase, putativeEncodes a putative leucine rich repeat transmembrane protein that is expressed in response to Pseudomonas syringae. Expression of SRRLK may be required for silencing via lsiRNAs.C.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+132Glycine maxPsAffx.CL892Contig1_atPsAffx.CL892Contig1--5e+0At4g14805protease inhibitor/seed storage/lipid transfer protein (LTP)-relatedC.G.S.X.
0.031e+034Hordeum vulgareHY10O14u_x_atHY10O14u--6e-2At2g47270transcription factor/ transcription regulatorC.G.S.X.
0.051e-656Oryza sativaOs04g02806009632.m01942--8e-7At5g14180MPL1 (MYZUS PERSICAE-INDUCED LIPASE 1)C.G.S.X.
0.172e-861Populus trichocarpaPtpAffx.35988.2.S1_atCV252857hypothetical protein-1e-8At5g14180MPL1 (MYZUS PERSICAE-INDUCED LIPASE 1)C.G.S.X.
0.023e+034Triticum aestivumTaAffx.3113.2.S1_atCA711186--9e-1At1g28580GDSL-motif lipase, putativeC.G.S.X.
0.023e+032Vitis vinifera1622085_atCB978859hypothetical protein LOC100262035-4e-4At5g47730SEC14 cytosolic factor, putative / polyphosphoinositide-binding protein, putativeC.G.S.X.
0.024e+032Zea maysZmAffx.758.1.A1_atAI746000hypothetical protein LOC100273671-3e-3At4g22260IM (IMMUTANS)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006629The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00043Link to KaPPA-View 4Triacylglycerol metabolism

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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