Gene omics information

Query gene ID At5g13720
Gene name -
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5570.6At5g13720831217-F:unknown;P:unknown;C:chloroplast, chloroplast inner membrane, chloroplast envelope;BOPAS.X.H.G.
0.8994.6At5g11840831057unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;OBPS.X.H.G.
0.8089.8At4g27990828912YGGT family proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast, chloroplast envelope;BOPS.X.H.G.
0.2726.2At4g25650828670ACD1-LIKE (ACD1-LIKE)Similar to ACD1. Leaves of antisense ACD1-like plants turn yellow in darkness like wild-type whereas antisense ACD1 plants remain dark after five days of dark treatment.S.X.H.G.
0.2522.6At1g02475839236-F:molecular_function unknown;P:biological_process unknown;C:chloroplast;BOPS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
19.399.6GSM133737Buchanan-Wollaston_A-9-bwoll-Co1_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
17.099.5GSM133738Buchanan-Wollaston_A-10-bwoll-Co2_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
13.299.4GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
12.699.3GSM133732Buchanan-Wollaston_A-4-bwoll-C5S_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
12.099.3E-ATMX-32-raw-cel-1562974409
11.999.3E-ATMX-32-raw-cel-1562974681
11.799.3GSM133735Buchanan-Wollaston_A-7-bwoll-Ei1_SLDGSE5727The effects of mutants in stress response pathways on gene expression during senescence
11.299.2E-ATMX-32-raw-cel-1562974621
11.199.2E-ATMX-32-raw-cel-1562974443
10.899.2GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.011e-138At1g21160838712GTP binding / GTPase/ translation initiation factorF:GTP binding, GTPase activity, translation initiation factor activity;P:biological_process unknown;C:cellular_component unknown;OBMFPAVC.G.S.X.
0.024e-136At2g32430817804galactosyltransferase family proteinF:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:protein amino acid glycosylation;C:endomembrane system, membrane;MPOC.G.S.X.
0.012e+034At5g45230834559disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAVC.G.S.X.
0.022e+034At5g48640834921cyclin family proteinF:cyclin-dependent protein kinase activity;P:regulation of cell cycle;C:cellular_component unknown;MFPOC.G.S.X.
0.012e+034At4g02150827472MOS6 (MODIFIER OF SNC1, 6)Encodes IMPORTIN ALPHA 3. Mutant plants act as suppressors of snc1 response and salicylic acid accumulation. Located in the nucleus. Involved in protein import. Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.C.G.S.X.
0.022e+034At4g12450826857unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFMOC.G.S.X.
0.022e+034At3g63470825522scpl40 (serine carboxypeptidase-like 40)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PFMOBC.G.S.X.
0.022e+034At2g37250818302ADK (ADENOSINE KINASE)encodes adenylate kinase that is located in the chloroplast involved in the coordination of metabolism and growthC.G.S.X.
0.012e+034At2g18700816385ATTPS11Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Glycine maxHgAffx.19919.1.S1_atCA939261--9e-1At5g13720-C.G.S.X.
0.171e-1169Hordeum vulgareContig6474_s_atContig6474--4e-11At5g13720-C.G.S.X.
0.219e-1375Oryza sativaOs07g0656600AK060061.1-Protein of unknown function DUF1334 family protein6e-13At5g13720-C.G.S.X.
0.292e-34147Populus trichocarpaPtpAffx.723.2.S1_a_atCV277361hypothetical protein-2e-34At5g13720-C.G.S.X.
0.066e+032Triticum aestivumTaAffx.109297.2.S1_atCA664107--4e+0At5g55210unknown proteinC.G.S.X.
0.154e-1787Vitis vinifera1620190_atCA817971hypothetical protein LOC100267159-1e-16At5g13720-C.G.S.X.
0.161e-1479Zea maysZm.14159.1.A1_atAY108992.1hypothetical protein LOC100192831-4e-14At5g13720-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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