Gene omics information

Query gene ID At5g13430
Gene name ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5673.0At5g13430831184ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putativeF:metal ion binding;P:oxidation reduction;C:mitochondrion, mitochondrial respiratory chain complex III, membrane;OBPMFAS.X.H.G.
0.7788.0At5g13450831186ATP synthase delta chain, mitochondrial, putative / H(+)-transporting two-sector ATPase, delta (OSCP) subunit, putativeF:hydrogen ion transporting ATP synthase activity, rotational mechanism;P:ATP synthesis coupled proton transport;C:mitochondrion, chloroplast, plasma membrane, membrane, mitochondrial proton-transporting ATP synthase complex, catalytic core F(1);BOMPFS.X.H.G.
0.7184.2At1g22450838851COX6B (CYTOCHROME C OXIDASE 6B)subunit 6b of cytochrome c oxidaseS.X.H.G.
0.6982.9At4g02580828130NADH-ubiquinone oxidoreductase 24 kDa subunit, putativeF:electron carrier activity, NAD or NADH binding, oxidoreductase activity, NADH dehydrogenase (ubiquinone) activity;P:response to oxidative stress, mitochondrial electron transport, NADH to ubiquinone;C:mitochondrion, respiratory chain complex I;BOMFPAS.X.H.G.
0.6882.2At1g20770838667unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFS.X.H.G.
0.6882.2At1g47420841147-F:molecular_function unknown;P:biological_process unknown;C:mitochondrion, nucleus;POS.X.H.G.
0.6579.6At2g21870816723unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion, nucleolus, chloroplast, plastid, membrane;PMOBAS.X.H.G.
0.5873.8At3g10920820263MSD1 (MANGANESE SUPEROXIDE DISMUTASE 1)manganese superoxide dismutase (MSD1)S.X.H.G.
0.5673.0At5g08060830700unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;POS.X.H.G.
0.5673.0At5g66510836783GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3)Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.098.9E-MEXP-1797-raw-cel-1669768021
7.798.9E-MEXP-1797-raw-cel-1669767940
7.598.8GSM305281control, biological replicate 1GSE12137LEAFY COTYLEDON1 is a key regulator of fatty acid biosynthesis in Arabidopsis thaliana
7.298.8E-MEXP-1797-raw-cel-1669768003
7.098.7E-MEXP-1797-raw-cel-1669767985
6.598.6E-MEXP-1797-raw-cel-1669768057
6.498.6E-MEXP-1797-raw-cel-1669767949
5.998.5E-MEXP-1797-raw-cel-1669768066
5.998.5GSM305283control, biological replicate 2GSE12137LEAFY COTYLEDON1 is a key regulator of fatty acid biosynthesis in Arabidopsis thaliana
5.898.4E-MEXP-1797-raw-cel-1669767958
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.9501213At5g13440831185ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putativeF:metal ion binding;P:oxidation reduction;C:mitochondrion, mitochondrial respiratory chain complex III;OBPMFAC.G.S.X.
0.024e-136At5g45820834622CIPK20 (CBL-INTERACTING PROTEIN KINASE 20)Encodes a CBL-interacting serine/threonine protein kinase comprised of an N-terminal kinase catalytic domain similar to SNF1/AMPK and a unique C-terminal regulatory domain.C.G.S.X.
0.014e-136At1g65810842892tRNA-splicing endonuclease positive effector-relatedF:unknown;P:biological_process unknown;C:cellular_component unknown;MBOFPAVC.G.S.X.
0.022e+034At1g76825-C.G.S.X.
0.012e+034At1g76720844006GTP binding / GTPase/ translation initiation factorF:GTP binding, GTPase activity, translation initiation factor activity;P:translational initiation;C:cellular_component unknown;MOBFPAVC.G.S.X.
0.022e+034At1g56590842113clathrin adaptor complexes medium subunit family proteinF:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:clathrin vesicle coat, clathrin adaptor complex;MFOPC.G.S.X.
0.026e+032At5g56060835704ATP binding / nucleotide binding / phenylalanine-tRNA ligaseF:phenylalanine-tRNA ligase activity, nucleotide binding, ATP binding;P:phenylalanyl-tRNA aminoacylation, translation;C:cytoplasm;PFMOBC.G.S.X.
0.026e+032At5g46560834699unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast thylakoid lumen;FPOMC.G.S.X.
0.016e+032At5g51500835224pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMOC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.321e-20101Glycine maxGma.5057.2.S1_atBE475334--7e-21At5g13430ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putativeC.G.S.X.
0.323e-40165Hordeum vulgareContig2815_atContig2815--1e-39At5g13430ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putativeC.G.S.X.
0.196e-1479Oryza sativaOs02g0520800AK102815.1-Ubiquinol-cytochrome c reductase iron-sulfursubunit, mitochondrial precursor (EC 1.10.2.2) (Rieskeiron-sulfur protein) (RISP)5e-14At5g13430ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putativeC.G.S.X.
0.372e-53210Populus trichocarpaPtpAffx.249.222.S1_atCV234896--2e-53At5g13430ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putativeC.G.S.X.
0.188e-1581Triticum aestivumTa.26743.1.A1_atCD491022--2e-12At5g13440ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putativeC.G.S.X.
0.455e-44176Vitis vinifera1617992_a_atCF213671hypothetical protein LOC100257494-2e-43At5g13430ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putativeC.G.S.X.
0.295e-2097Zea maysZm.7348.1.A1_atBM078388hypothetical protein LOC100192468-6e-17At5g13440ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0055114The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00190Link to KEGG PATHWAYOxidative phosphorylation
01100Link to KEGG PATHWAYMetabolic pathways
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