Gene omics information

Query gene ID At5g13130
Gene name ATP binding
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8693.1At5g13130831152ATP bindingF:ATP binding;P:biological_process unknown;C:cellular_component unknown;MOPVBFAS.X.H.G.
0.7687.4At2g071303767761-F:unknown;P:unknown;C:unknownS.X.H.G.
0.7486.1At5g28160832891kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMS.X.H.G.
0.7083.5At1g09030837424NF-YB4 (NUCLEAR FACTOR Y, SUBUNIT B4)F:transcription factor activity;P:regulation of transcription;C:intracellular, nucleus;MPFOS.X.H.G.
0.6982.9At5g27570832817WD-40 repeat family proteinF:signal transducer activity;P:signal transduction;C:CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex;MFBOPAS.X.H.G.
0.5974.7At1g33830840278avirulence-responsive family protein / avirulence induced gene (AIG1) family proteinF:GTP binding;P:response to bacterium;C:cellular_component unknown;MPOBS.X.H.G.
0.5974.7At1g368303767037transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.5773.8At4g18080827533unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plant-type cell wall;PS.X.H.G.
0.5673.0At1g21860838788sks7 (SKU5 Similar 7)F:oxidoreductase activity, copper ion binding;P:unknown;C:plant-type cell wall;FBPMOAS.X.H.G.
0.5469.5At3g18120821337F-box family protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
348.1100.0GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
335.8100.0GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
318.8100.0GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
317.1100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
311.9100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
307.0100.0GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
258.2100.0GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
248.1100.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
244.3100.0GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
222.9100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.143e-1687At5g50780835150ATP bindingF:ATP binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVAC.G.S.X.
0.145e-963At4g24970828599ATP-binding region, ATPase-like domain-containing proteinF:ATP binding;P:unknown;C:membrane;MOPBFAC.G.S.X.
0.025e-654At4g36290829786ATP-binding region, ATPase-like domain-containing proteinF:ATP binding;P:biological_process unknown;C:cellular_component unknown;MPOBC.G.S.X.
0.013e-138At3g61890825362ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX 12)Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. Loss of function mutant has abnormally shaped leaves and stems.C.G.S.X.
0.013e-138At2g37130818289peroxidase 21 (PER21) (P21) (PRXR5)F:electron carrier activity, peroxidase activity, heme binding;P:defense response to fungus;C:endomembrane system;PFOC.G.S.X.
0.013e-138At1g70610843398ATTAP1member of TAP subfamilyC.G.S.X.
0.011e+036At5g18700831988EMB3013 (embryo defective 3013)F:protein serine/threonine kinase activity, binding, protein kinase activity, kinase activity, ATP binding;P:embryonic development ending in seed dormancy;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.021e+036At4g36280829785ATP-binding region, ATPase-like domain-containing proteinF:ATP binding;P:biological_process unknown;C:cellular_component unknown;MPOBC.G.S.X.
0.011e+036At2g22410816772pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:unknown;POMFBC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e+036Glycine maxGmaAffx.72312.1.S1_atBI892620--3e-56At1g19100ATP-binding region, ATPase-like domain-containing protein-relatedC.G.S.X.
0.022e-344Hordeum vulgareContig10840_atContig10840--4e-6At5g50780ATP bindingC.G.S.X.
0.092e-965Oryza sativaOsAffx.26130.1.S1_x_at---0C.G.S.X.
0.235e-1997Populus trichocarpaPtpAffx.212897.1.S1_atpmrna25241hypothetical protein-3e-49At4g24970ATP-binding region, ATPase-like domain-containing proteinC.G.S.X.
0.013e-138Triticum aestivumTaAffx.120037.1.S1_atBJ246898--1e+0At4g21570unknown proteinC.G.S.X.
0.015e+032Vitis vinifera1619999_atCD799397hypothetical protein LOC100261404-8e-1At5g01712CPuORF48 (Conserved peptide upstream open reading frame 48)C.G.S.X.
0.023e-240Zea maysZm.15119.1.A1_atBM079069--2e+0At2g06960oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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