Gene omics information

Query gene ID At5g13110
Gene name G6PD2 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 2)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3338.1At5g13110831150G6PD2 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 2)Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.S.X.H.G.
0.8290.9At1g78050844140PGM (PHOSPHOGLYCERATE/BISPHOSPHOGLYCERATE MUTASE)F:intramolecular transferase activity, phosphotransferases, catalytic activity;P:response to nitrate, metabolic process;C:chloroplast;BOMFPAS.X.H.G.
0.7586.9At5g416708341696-phosphogluconate dehydrogenase family proteinF:in 6 functions;P:response to fructose stimulus, response to cadmium ion, response to sucrose stimulus, response to glucose stimulus;C:mitochondrion, chloroplast;BOMPFAVS.X.H.G.
0.7083.5At1g24280839044G6PD3 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 3)Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.S.X.H.G.
0.6781.6At2g27510817297ATFD3 (ferredoxin 3)F:electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding;P:electron transport chain;C:chloroplast;BOPAMFVS.X.H.G.
0.5673.0At1g641908427246-phosphogluconate dehydrogenase family proteinF:in 6 functions;P:response to salt stress;C:chloroplast, membrane;BOMPFAVS.X.H.G.
0.4050.8At1g74030843741enolase, putativeF:phosphopyruvate hydratase activity;P:in 12 processes;C:phosphopyruvate hydratase complex, chloroplast;OBMFAPS.X.H.G.
0.3846.7At4g05390825887ATRFNR1 (ROOT FNR 1)Encodes a root-type ferredoxin:NADP(H) oxidoreductase.S.X.H.G.
0.2930.3At5g13420831183transaldolase, putativeF:catalytic activity, transaldolase activity;P:response to cadmium ion;C:mitochondrion, chloroplast stroma, chloroplast;BOPMAFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
79.199.9GSM184508Pericycle root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
48.699.8GSM184520Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
46.199.8GSM184521Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
42.999.8GSM184519Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
42.199.8GSM184934Arabidopsis, whole roots, 140 mM NaCl, 16 hour, replicate 2GSE7642Time course expression analysis of the salt stress response in Arabidopsis roots
36.799.7GSM184488Epidermis&Cortex root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
31.199.7GSM184493Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
29.999.7GSM134301Penfield_1-3_endosperm-control_Rep3_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
29.499.7GSM184511Pericycle root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
28.899.7GSM184492Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.7101507At1g24280839044G6PD3 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 3)Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.C.G.S.X.
0.314e-1583At5g35790833559G6PD1 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 1)Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root.C.G.S.X.
0.022e-757At5g40760834076G6PD6 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 6)Encodes a cytosolic glucose-6-phosphate dehydrogenase that is insensitive to reduction by DTT and whose mRNA is expressed ubiquitously.C.G.S.X.
0.034e-654At1g09420837465G6PD4 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 4)Encodes a protein similar to glucose-6-phosphate dehydrogenase but, based on amino acid differences in the active site and lack of activity, does not encode a functional G6PDH. The amino acid sequence for the consensus sequence of the G6PDH active site (DHYLGKE) differs in three places in this protein. gc exon splice site at 20574 is based on protein alignment, and is not confirmed experimentally.C.G.S.X.
0.062e-552At3g27300822349G6PD5 (glucose-6-phosphate dehydrogenase 5)F:glucose-6-phosphate dehydrogenase activity;P:response to cadmium ion, pentose-phosphate shunt, oxidative branch, glucose metabolic process;C:cytosol, chloroplast;BOMPFVC.G.S.X.
0.022e-138At5g05710830455pleckstrin homology (PH) domain-containing proteinF:molecular_function unknown;P:unknown;C:cellular_component unknown;MOPFVC.G.S.X.
0.012e-138At5g19690832089STT3A (STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE A)encodes an oligosaccharyl transferase involved response to high salt. Mutants are hypersensitive to high salt conditionsC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.407e-61236Glycine maxGmaAffx.92642.1.S1_atCF808367--2e-61At5g13110G6PD2 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 2)C.G.S.X.
0.027e+032Hordeum vulgareHV_CEb0006L06r2_atHV_CEb0006L06r2--7e-2At5g67450AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1)C.G.S.X.
0.382e-55218Oryza sativaOs07g0406300AK064867.1-Glucose-6-phosphate 1-dehydrogenase precursor (EC1.1.1.49)9e-97At1g24280G6PD3 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 3)C.G.S.X.
0.635e-151535Populus trichocarpaPtp.4667.1.S1_s_atBU875168hypothetical protein-2e-151At5g13110G6PD2 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 2)C.G.S.X.
0.346e-39163Triticum aestivumTa.5177.3.S1_a_atCK208859--7e-39At5g13110G6PD2 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 2)C.G.S.X.
0.245e-43174Vitis vinifera1614153_atCF207979hypothetical protein LOC100267681-6e-43At5g13110G6PD2 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 2)C.G.S.X.
0.288e-27121Zea maysZm.15767.1.S1_atAY107084.1--6e-46At1g24280G6PD3 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0006006The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides.
XGO:0009051The branch of the pentose-phosphate shunt which involves the oxidation of glucose 6-P and produces ribulose 5-P, reduced NADP+ and carbon dioxide (CO2).
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00117Link to KaPPA-View 4Pentose phosphate cycle



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00030Link to KEGG PATHWAYPentose phosphate pathway
00480Link to KEGG PATHWAYGlutathione metabolism
01065Link to KEGG PATHWAYBiosynthesis of alkaloids derived from histidine and purine
01070Link to KEGG PATHWAYBiosynthesis of plant hormones
01100Link to KEGG PATHWAYMetabolic pathways
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