CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g13080

Gene name WRKY75

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.13 5.8 At5g13080 831147 WRKY75 WRKY75 is one of several transcription factors induced during Pi deprivation. It is nuclear localized and regulated differentially during Pi starvation. RNAi mediated suppression of WRKY75 made the plants more susceptible to Pi stress as indicated by the higher accumulation of anthocyanin during Pi starvation. S.X. H.G.
0.33 38.1 At2g35730 818143 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:endomembrane system;P S.X. H.G.
0.15 7.8 At5g11210 830991 ATGLR2.5 member of Putative ligand-gated ion channel subunit family S.X. H.G.
0.11 4.1 At2g45220 819130 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:membrane, plant-type cell wall;PBFOM S.X. H.G.
0.11 4.1 At4g23700 828470 ATCHX17 (CATION/H+ EXCHANGER 17) member of Putative Na+/H+ antiporter family S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
175.7 100.0 GSM142837 MG001_ATH1_A16-Torres-6N1 GSE6176 Impact of Type III effectors on plant defense responses
102.0 99.9 GSM142838 MG001_ATH1_A17-Torres-6N3 GSE6176 Impact of Type III effectors on plant defense responses
97.7 99.9 GSM142839 MG001_ATH1_A18-Torres-6N6 GSE6176 Impact of Type III effectors on plant defense responses
97.5 99.9 GSM131318 AtGen_6-3322_Saltstress-Roots-3.0h_Rep2 GSE5623 AtGenExpress: Stress Treatments (Salt stress)
86.8 99.9 GSM131317 AtGen_6-3321_Saltstress-Roots-3.0h_Rep1 GSE5623 AtGenExpress: Stress Treatments (Salt stress)
83.4 99.9 GSM133029 BC482-1 GSE5684 AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
66.2 99.8 GSM131322 AtGen_6-3422_Saltstress-Roots-6.0h_Rep2 GSE5623 AtGenExpress: Stress Treatments (Salt stress)
64.0 99.8 GSM133030 BC482-2 GSE5684 AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
61.9 99.8 GSM142902 WW001_ATH1_A1-WILLA-CON GSE6181 Assembly of the cell wall pectic matrix.
61.8 99.8 E-MEXP-711-raw-cel-1563002902
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.28 9e-10 63 At3g01970 821270 WRKY45 member of WRKY Transcription Factor; Group I C.G. S.X.
0.08 4e-9 61 At1g69310 843262 WRKY57 member of WRKY Transcription Factor; Group II-c C.G. S.X.
0.05 4e-6 52 At4g18170 827542 WRKY28 member of WRKY Transcription Factor; Group II-c C.G. S.X.
0.13 4e-6 52 At2g46130 819220 WRKY43 member of WRKY Transcription Factor; Group II-c C.G. S.X.
0.11 2e-4 46 At5g41570 834159 WRKY24 member of WRKY Transcription Factor; Group II-c C.G. S.X.
0.03 2e-4 46 At5g56270 835726 WRKY2 WRKY transcription factor 2 C.G. S.X.
0.13 1e-2 40 At1g64000 842703 WRKY56 member of WRKY Transcription Factor; Group II-c C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.25 3e-7 56 Glycine max GmaAffx.33784.1.S1_at CA819584 WRKY25 protein - 2e-7 At5g13080 WRKY75 C.G. S.X.
0.06 4e-4 44 Hordeum vulgare Contig13268_at Contig13268 - - 5e-12 At2g46130 WRKY43 C.G. S.X.
0.13 8e-12 71 Oryza sativa Os11g0490900 AK108860.1 - WRKY transcription factor 72 1e-11 At5g13080 WRKY75 C.G. S.X.
0.36 3e-29 129 Populus trichocarpa Ptp.3685.1.S1_at CV264598 hypothetical protein - 3e-29 At5g13080 WRKY75 C.G. S.X.
0.10 2e-1 36 Triticum aestivum TaAffx.5112.1.S1_at CA721566 - - 1e-5 At5g41570 WRKY24 C.G. S.X.
0.20 8e-23 105 Vitis vinifera 1622778_at BQ797582 WRKY-type DNA binding protein 1 - 5e-22 At5g13080 WRKY75 C.G. S.X.
0.15 1e-7 56 Zea mays Zm.9674.1.A1_at BM350297 - - 4e-7 At5g13080 WRKY75 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0048527 The process whose specific outcome is the progression of the lateral root over time, from its formation to the mature structure. A lateral root is one formed from pericycle cells located on the xylem radius of the root, as opposed to the initiation of the main root from the embryo proper.
X GO:0032107 Any process that modulates the frequency, rate or extent of a response to nutrient levels.
X GO:0043620 Modulation of the frequency, rate or extent of transcription as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).
C GO:0006355 Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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