Gene omics information

Query gene ID At5g12420
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8391.4At5g12420831117unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAFS.X.H.G.
0.8894.0At2g48140819426EDA4 (embryo sac development arrest 4)F:lipid binding;P:megagametogenesis, lipid transport;C:anchored to membrane;PBMOFVS.X.H.G.
0.8793.5At1g74460843787GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOMS.X.H.G.
0.8592.4At4g38080829964hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOVBFAS.X.H.G.
0.8491.9At2g23540816886GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOMS.X.H.G.
0.8190.4At5g09530830812hydroxyproline-rich glycoprotein family proteinF:unknown;P:biological_process unknown;C:endomembrane system;MBOPFVAS.X.H.G.
0.8190.4At5g13580831202ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:response to nematode;C:membrane;BOMAFPVS.X.H.G.
0.8190.4At5g44550834482integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.8089.8At2g48130819425protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to membrane;PBOMS.X.H.G.
0.7989.1At4g20390827787integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
116.399.9GSM75509Col-0 2h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
81.899.9GSM75512Col-0 0h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
79.299.9E-ATMX-33-raw-cel-1562596241
74.399.9E-MEXP-1094-raw-cel-1379507313
72.399.9E-MEXP-828-raw-cel-1156922987
69.399.9GSM75517slr-1 2h NAA replicate 1GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
68.099.9GSM75513Col-0 2h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
62.899.8E-MEXP-1094-raw-cel-1379507273
62.099.8GSM75521slr-1 6h NAA replicate 2GSE3350SLR/IAA14-dependent auxin induced lateral root initiation
58.899.8E-MEXP-828-raw-cel-1156922968
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.8501195At5g16350831496unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAFC.G.S.X.
0.433e-1583At5g53380835419unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAC.G.S.X.
0.201e-1171At5g22490832310condensation domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAFC.G.S.X.
0.035e-859At3g49190824080condensation domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAFC.G.S.X.
0.043e-654At3g49200824081unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAC.G.S.X.
0.081e-552At5g53390835420unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAC.G.S.X.
0.037e-446At5g37300833704WSD1Encodes a bifunctional enzyme, wax ester synthase (WS) and diacylglycerol acyltransferase (DGAT). In vitro assay indicated a ratio of 10.9 between its WS and DGAT activities. Both mutant and in vivo expression/analysis in yeast studies indicated a role in wax biosynthesis.C.G.S.X.
0.012e-138At3g17790821047PAP17F:phosphatase activity, protein serine/threonine phosphatase activity, acid phosphatase activity;P:response to hydrogen peroxide, cellular phosphate ion homeostasis;C:cell surface;MOBPFAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e+034Glycine maxGmaAffx.56720.1.A1_atCD391617--1e-2At2g19480NAP1C.G.S.X.
0.025e+032Hordeum vulgareContig19857_atContig19857--6e-1At5g13660unknown proteinC.G.S.X.
0.029e-240Oryza sativaOs.49092.1.S1_at---0C.G.S.X.
0.043e-138Populus trichocarpaPtpAffx.210274.1.S1_atpmrna20208hypothetical protein-3e-12At3g49200unknown proteinC.G.S.X.
0.023e+034Triticum aestivumTaAffx.4471.1.S1_atCA740182--1e+1At5g25890IAA28 (INDOLE-3-ACETIC ACID INDUCIBLE 28)C.G.S.X.
0.039e-444Vitis vinifera1619772_atCF205273.1hypothetical protein LOC100260458-2e+0At3g05070-C.G.S.X.
0.025e+032Zea maysZm.2510.1.A1_atAW225293--1e+0At1g16920ATRABA1B (ARABIDOPSIS RAB GTPASE HOMOLOG A1B)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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