Gene omics information

Query gene ID At5g12220
Gene name las1-like family protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3133.8At5g12220831096las1-like family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPS.X.H.G.
0.2930.3At1g63810842684-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPAS.X.H.G.
0.2726.2At3g57940824963unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMOFAPVS.X.H.G.
0.2217.5At2g40700818665DEAD/DEAH box helicase, putative (RH17)F:helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding;P:unknown;C:unknown;BOMFPAVS.X.H.G.
0.2115.8At5g65900836719DEAD/DEAH box helicase, putativeF:helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding;P:unknown;C:cellular_component unknown;MOBFPVAS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
38.199.8GSM242957Mock day 3 (day3E1)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.011e-242At1g65440842855GTB1Related to yeast Spt6 protein, which functions as part of a protein complex in transcription initiation and also plays a role in chromatin structure / assembly.C.G.S.X.
0.012e-138At1g34270840327exostosin family proteinF:catalytic activity;P:biological_process unknown;C:endomembrane system, membrane;PMOFC.G.S.X.
0.012e-138At1g63210842626RNA binding / hydrolase, acting on ester bonds / protein binding / transcription elongation regulatorF:transcription elongation regulator activity, protein binding, hydrolase activity, acting on ester bonds, RNA binding;P:regulation of transcription from RNA polymerase II promoter, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;C:unknown;BMOFPAC.G.S.X.
0.019e-136At5g21140832240emb1379 (embryo defective 1379)F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;MFPOC.G.S.X.
0.019e-136At5g46690834712bHLH071 (beta HLH protein 71)F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFOMC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e+036Glycine maxGmaAffx.74233.1.S1_atBQ630323--2e-2At3g12390nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeC.G.S.X.
0.012e+034Hordeum vulgareContig9493_atContig9493--8e-2At1g07950surfeit locus protein 5 family protein / SURF5 family proteinC.G.S.X.
0.012e+036Oryza sativaOsAffx.9108.1.S1_at---0C.G.S.X.
0.036e-963Populus trichocarpaPtp.1035.1.S1_atCK090165--3e-9At5g12220las1-like family proteinC.G.S.X.
0.022e-138Triticum aestivumTaAffx.55846.1.S1_atCA660442--4e-3At3g42310unknown proteinC.G.S.X.
0.021e+034Vitis vinifera1607241_atCB980618hypothetical protein LOC100264706-7e-21At2g35060KUP11C.G.S.X.
0.014e-136Zea maysZm.9509.1.A1_atBM332884hypothetical protein LOC100279466-1e+0At1g77770protein binding / zinc ion bindingC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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