Gene omics information

Query gene ID At5g12050
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2115.8At5g12050831078unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFBS.X.H.G.
0.5773.8At5g62280836349unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5570.6At5g02760831234protein phosphatase 2C family protein / PP2C family proteinF:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;PMOFBAVS.X.H.G.
0.071.9At5g04190830297PKS4 (phytochrome kinase substrate 4)Encodes phytochrome kinase substrate 4, a phytochrome signaling component involved in phototropism.S.X.H.G.
0.030.6At1g29460839822auxin-responsive protein, putativeF:molecular_function unknown;P:response to auxin stimulus;C:mitochondrion;PS.X.H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.036e-446At3g13980820612unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFBVC.G.S.X.
0.023e-240At3g42800823322unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;OMBFPC.G.S.X.
0.025e-136At5g35960833587protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.015e-136At5g22110832272ATDPB2 (ARABIDOPSIS THALIANA DNA POLYMERASE EPSILON SUBUNIT B2)Encodes a protein with similarity to DNA polymerase epsilon subunit B an essential gene that is required for DNA replication. Homozygous mutants are embryo lethal. Expressed in meristematic , rapidly dividing regions.C.G.S.X.
0.015e-136At3g10040820165transcription factorF:transcription factor activity;P:regulation of transcription;C:unknown;OMFPBVAC.G.S.X.
0.025e-136At3g44880823622ACD1 (ACCELERATED CELL DEATH 1)Encodes a pheide a oxygenase (PAO). Accelerated cell death (acd1) mutants show rapid, spreading necrotic responses to both virulent and avirulent Pseudomonas syringae pv. maculicola or pv. tomato pathogens and to ethylene.C.G.S.X.
0.015e-136At2g08986815431unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMBPFVC.G.S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-138Glycine maxGmaAffx.71999.1.S1_atAW100461--2e-1At2g16592-C.G.S.X.
0.037e-238Hordeum vulgareContig10275_s_atContig10275UDP-D-xylose epimerase 2-8e-1At4g27240zinc finger (C2H2 type) family proteinC.G.S.X.
0.034e+034Oryza sativaOs08g02719009636.m01716--9e-1At4g21780unknown proteinC.G.S.X.
0.048e-136Populus trichocarpaPtpAffx.223877.1.S1_atpmrna42097hypothetical protein-3e-1At2g38695unknown proteinC.G.S.X.
0.024e-240Triticum aestivumTaAffx.78561.1.S1_atCA730824--7e-2At4g31860protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
0.023e-342Vitis vinifera1615449_atCB004449--9e-3At5g12050unknown proteinC.G.S.X.
0.036e-238Zea maysZmAffx.1421.1.S1_at40794996-96--3e+0At5g52270vesicle transport protein-relatedC.G.S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage