CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g11800

Gene name KEA6

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.86 93.1 At5g11800 831053 KEA6 member of Putative potassium proton antiporter family S.X. H.G.
0.64 78.9 At4g24840 828587 - F:molecular_function unknown;P:protein transport, Golgi organization;C:vacuole;MFOP S.X. H.G.
0.63 78.1 At3g17900 821058 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFO S.X. H.G.
0.57 73.8 At1g34550 840358 EMB2756 (EMBRYO DEFECTIVE 2756) F:unknown;P:embryonic development ending in seed dormancy, response to cadmium ion;C:unknown;OPMFBA S.X. H.G.
0.56 73.0 At4g09630 826549 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFBVA S.X. H.G.
0.54 69.5 At4g38500 830007 unknown protein F:unknown;P:unknown;C:Golgi apparatus;POBA S.X. H.G.
0.53 68.6 At4g38200 829976 guanine nucleotide exchange family protein F:binding, ARF guanyl-nucleotide exchange factor activity, guanyl-nucleotide exchange factor activity;P:regulation of ARF protein signal transduction;C:chloroplast;MFOPB S.X. H.G.
0.53 68.6 At5g41950 834200 binding F:binding;P:biological_process unknown;C:cellular_component unknown;OMBFPAV S.X. H.G.
0.53 68.6 At3g17430 821007 phosphate translocator-related F:organic anion transmembrane transporter activity;P:unknown;C:endomembrane system;PMFOB S.X. H.G.
0.53 68.6 At4g34450 829596 coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative F:protein binding, clathrin binding, structural molecule activity, binding;P:intracellular protein transport, vesicle-mediated transport;C:chloroplast, membrane;MFOPB S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
37.8 99.8 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
35.9 99.7 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
33.2 99.7 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
30.3 99.7 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
27.8 99.7 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
27.1 99.7 GSM265412 Arabidopsis, whole roots, -Fe, replicate 2 GSE10496 Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
24.4 99.6 GSM176879 AWP_Control_1 GSE7334 Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
24.0 99.6 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
23.3 99.6 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
22.7 99.6 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.31 3e-22 107 At2g19600 816479 ATKEA4 member of Putative potassium proton antiporter family C.G. S.X.
0.13 1e-21 105 At5g51710 835245 KEA5 member of Putative potassium proton antiporter family C.G. S.X.
0.02 4e-3 44 At3g45230 823659 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPBMFVA C.G. S.X.
0.02 6e-2 40 At3g58730 825042 vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) F:ATPase activity, coupled to transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism;P:ATP synthesis coupled proton transport;C:vacuolar membrane, plasma membrane, vacuole, membrane, plant-type vacuole;BMAOFP C.G. S.X.
0.01 2e-1 38 At5g23020 832366 IMS2 (2-ISOPROPYLMALATE SYNTHASE 2) methylthioalkymalate synthase-like. Also known as 2-isopropylmalate synthase (IMS2). encodes a methylthioalkylmalate synthase involved in the biosynthesis of aliphatic glucosinolates which accepts all the omega-methylthio-2-oxoalkanoic acids needed to form the known C3 to C8 glucosinolates in Arabidopsis. C.G. S.X.
0.01 2e-1 38 At5g13840 831230 FZR3 (FIZZY-RELATED 3) F:signal transducer activity;P:signal transduction;C:chloroplast, heterotrimeric G-protein complex;MFBOPA C.G. S.X.
0.01 2e-1 38 At3g61170 825289 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:biological_process unknown;C:mitochondrion;POMFB C.G. S.X.
0.02 2e-1 38 At3g10400 820203 RNA recognition motif (RRM)-containing protein F:RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPFOBV C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 1e-9 65 Glycine max GmaAffx.74038.1.S1_at BI699523 coronatine-insensitive 1 - 3e-10 At5g11800 KEA6 C.G. S.X.
0.19 1e-22 107 Hordeum vulgare Contig14465_at Contig14465 - - 3e-22 At5g11800 KEA6 C.G. S.X.
0.22 9e-18 93 Oryza sativa Os06g0561200 AK120422.1 - Potassium/proton antiporter-like protein 5e-31 At2g19600 ATKEA4 C.G. S.X.
0.61 9e-156 551 Populus trichocarpa PtpAffx.206686.1.S1_at pmrna13265 potassium efflux antiporter - 6e-156 At5g11800 KEA6 C.G. S.X.
0.01 4e+0 34 Triticum aestivum TaAffx.54204.1.S1_at CA684489 - - 2e+1 At5g13670 nodulin MtN21 family protein C.G. S.X.
0.02 3e-1 36 Vitis vinifera 1615871_at CB978454 hypothetical protein LOC100249692 - 4e+0 At5g66180 - C.G. S.X.
0.02 4e-1 36 Zea mays ZmAffx.196.1.A1_at AI668462 hypothetical protein LOC100278421 - 5e-5 At3g15820 phosphatidic acid phosphatase-related / PAP2-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0006813 The directed movement of potassium ions (K+) into, out of, within or between cells.
L GO:0006812 The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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