Gene omics information

Query gene ID At5g11510
Gene name MYB3R-4 (myb domain protein 3R-4)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5065.3At5g11510831023MYB3R-4 (myb domain protein 3R-4)Arabidopsis thaliana putative c-myb-like transcription factor MYB3R-4S.X.H.G.
0.6075.7At3g16730820925unknown proteinF:unknown;P:unknown;C:cellular_component unknown;MOPFS.X.H.G.
0.5773.8At3g17365821000catalytic/ methyltransferaseF:methyltransferase activity, catalytic activity;P:metabolic process;C:cellular_component unknown;OMBPFAS.X.H.G.
0.4050.8At5g40300834028integral membrane protein, putativeF:molecular_function unknown;P:biological_process unknown;C:plasma membrane, membrane;POMS.X.H.G.
0.3338.1At1g67210843041proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family proteinF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPOFVS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
811.5100.0GSM133773Lindsey_1-25_torpedo-meristem_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
175.1100.0GSM133768Lindsey_1-20_torpedo-basal_Rep5_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
63.499.8E-ATMX-13-raw-cel-1556149823
32.799.7GSM133774Lindsey_1-26_torpedo-meristem_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
32.699.7GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
31.799.7E-ATMX-13-raw-cel-1556149775
31.499.7GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
26.399.7GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
25.599.7GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
25.399.6GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.117e-1893At4g32730829409PC-MYB1Encodes a putative c-myb-like transcription factor with three MYB repeats.C.G.S.X.
0.046e-344At5g02320831802MYB3R-5 (MYB DOMAIN PROTEIN 3R-5)Encodes a putative c-MYB-like transcription factor of the MYB3R factor gene family (MYB3R5).C.G.S.X.
0.036e-344At2g13960815880myb family transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent, regulation of transcription;C:chloroplast;OMPFVC.G.S.X.
0.032e-242At3g09370820094MYB3R-3 (myb domain protein 3R-3)putative c-myb-like transcription factor (MYB3R3) mRNA,C.G.S.X.
0.019e-240At4g18770827611MYB98 (myb domain protein 98)MYB98 is a member of the R2R3-MYB gene family, the members of which likely encode transcription factors. Within an ovule, MYB98 is expressed exclusively in the synergid cells, and mutations in this gene affect the female gametophyte specifically. myb98 female gametophytes are affected in two unique features of the synergid cell, pollen tube guidance and the filiform apparatus, but are otherwise normal. This suggests that MYB98 controls the development of specific features within the synergid cell during female gametophyte development. MYB98 also is expressed in trichomes and endosperm. Homozygous myb98 mutants exhibit no sporophytic defects, including trichome and endosperm defects.C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-759Glycine maxGmaAffx.63677.1.S1_atAI899917MYB transcription factor MYB65-9e-23At2g13960myb family transcription factorC.G.S.X.
0.142e-1377Hordeum vulgareContig26554_atContig26554--9e-14At5g11510MYB3R-4 (myb domain protein 3R-4)C.G.S.X.
0.124e-24115Oryza sativaOs01g0229000AJ495800.1-Hypothetical protein6e+0At5g05040-C.G.S.X.
0.061e-140Populus trichocarpaPtp.608.1.S1_atAJ567344.1hypothetical protein-1e-21At3g09370MYB3R-3 (myb domain protein 3R-3)C.G.S.X.
0.016e-344Triticum aestivumTa.7356.2.S1_atBF473111--5e-1At1g73230nascent polypeptide-associated complex (NAC) domain-containing proteinC.G.S.X.
0.014e-136Vitis vinifera1617267_atCF205118.1--1e-18At5g27700structural constituent of ribosomeC.G.S.X.
0.011e-242Zea maysZm.15454.1.A1_atCD448347hypothetical protein LOC100274941-5e+0At3g05860MADS-box protein (AGL45)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage