Gene omics information

Query gene ID At5g11180
Gene name ATGLR2.6
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6075.7At5g11180830988ATGLR2.6member of Putative ligand-gated ion channel subunit familyS.X.H.G.
0.6982.9At2g39160818501unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.6478.9At3g57960824965emsy N terminus domain-containing protein / ENT domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.6075.7At3g45110823647unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5974.7At1g22720838878wall-associated kinase, putativeF:protein tyrosine kinase activity, protein kinase activity, kinase activity, calcium ion binding, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;PMOFVBS.X.H.G.
0.5673.0At2g43450818946unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5469.5At3g18460821375unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOS.X.H.G.
0.5267.4At5g56770835779unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
0.5267.4At5g50270835092F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.5267.4At1g46840841118F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:membrane;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
250.8100.0GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
232.9100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
207.8100.0GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
201.2100.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
178.5100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
177.6100.0GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
176.7100.0GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
176.5100.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
168.4100.0GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
166.1100.0GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.7601176At5g11210830991ATGLR2.5member of Putative ligand-gated ion channel subunit familyC.G.S.X.
0.029e-550At2g24720817008ATGLR2.2member of Putative ligand-gated ion channel subunit familyC.G.S.X.
0.029e-550At2g29110817459ATGLR2.8member of Putative ligand-gated ion channel subunit familyC.G.S.X.
0.034e-448At5g27100832768ATGLR2.1member of Putative ligand-gated ion channel subunit familyC.G.S.X.
0.019e-240At5g48410834896ATGLR1.3member of Putative ligand-gated ion channel subunit familyC.G.S.X.
0.019e-240At5g48400834895ATGLR1.2member of Putative ligand-gated ion channel subunit familyC.G.S.X.
0.013e-138At3g18880821421ribosomal protein S17 family proteinF:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, ribosome, intracellular;BOAPFMC.G.S.X.
0.013e-138At2g31390817697pfkB-type carbohydrate kinase family proteinF:kinase activity, ribokinase activity;P:D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase;C:plasma membrane;BOPAMFC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.012e+036Glycine maxGma.8851.1.A1_atBU546657--5e+0At5g58920unknown proteinC.G.S.X.
0.013e+034Hordeum vulgareContig9077_atContig9077--1e-3At3g17840RLK902C.G.S.X.
0.024e-242Oryza sativaOs09g04286009637.m02252--3e-2At3g24506unknown proteinC.G.S.X.
0.062e-346Populus trichocarpaPtpAffx.206854.1.S1_atpmrna13618glutamate-gated kainate-type ion channel receptor subunit GluR5-1e-3At5g11180ATGLR2.6C.G.S.X.
0.011e+036Triticum aestivumTaAffx.105893.1.S1_atCA728292--3e-1At1g74890ARR15 (RESPONSE REGULATOR 15)C.G.S.X.
0.012e+034Vitis vinifera1616518_atCF202624.1--4e+0At2g22000PROPEP6 (Elicitor peptide 6 precursor)C.G.S.X.
0.016e-136Zea maysZm.5851.1.A1_atBM337140hypothetical protein LOC100272940-1e-2At4g38630RPN10 (REGULATORY PARTICLE NON-ATPASE 10)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0006874Any process involved in the maintenance of an internal equilibrium of calcium ions at the level of a cell.
NGO:0009416A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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