CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g10740

Gene name protein phosphatase 2C-related / PP2C-related

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.40 50.8 At5g10740 830941 protein phosphatase 2C-related / PP2C-related F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOBFVA S.X. H.G.
0.89 94.6 At1g14560 838018 mitochondrial substrate carrier family protein F:transporter activity, binding;P:transport, mitochondrial transport;C:endomembrane system, mitochondrial inner membrane, membrane;MFPO S.X. H.G.
0.50 65.3 At1g15470 838117 transducin family protein / WD-40 repeat family protein F:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MFBOPA S.X. H.G.
0.38 46.7 At2g17530 816260 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MOFPBVA S.X. H.G.
0.29 30.3 At1g18150 838394 ATMPK8 ATMPK8, S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
130.1 99.9 GSM142736 DH001_ATH1_A3-TCP1 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
105.3 99.9 E-MEXP-1138-raw-cel-1432773290
88.4 99.9 E-MEXP-1138-raw-cel-1432773258
79.3 99.9 E-MEXP-1138-raw-cel-1432773322
77.2 99.9 GSM142739 DH001_ATH1_A6-TCP2 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
62.1 99.8 GSM142740 DH001_ATH1_A7-MPG1 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
60.0 99.8 GSM131593 ATGE_36_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
59.5 99.8 GSM133957 Fukuda_1-2_0B_Rep2_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.
46.1 99.8 GSM239252 Columbia glabrous (C24) wild type stamen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
45.4 99.8 E-MEXP-1138-raw-cel-1432773066
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.59 0 817 At5g24940 832564 protein phosphatase 2C, putative / PP2C, putative F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOBFAV C.G. S.X.
0.56 4e-82 305 At4g31750 829303 WIN2 (HOPW1-1-INTERACTING 2) Encodes HopW1-1-Interacting protein 2 (WIN2). Interacts with the P. syringae effector HopW1-1. WIN2 has protein phosphatase activity. Modulates plant defenses against bacteria. Three WIN proteins are identified so far (WIN1: AT1G80600; WIN2: AT4G31750; WIN3: AT5G13320). C.G. S.X.
0.01 9e-3 42 At2g39850 818572 identical protein binding / serine-type endopeptidase F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:plant-type cell wall;BPOFAM C.G. S.X.
0.05 3e-2 40 At3g15260 820757 protein phosphatase 2C, putative / PP2C, putative F:protein serine/threonine phosphatase activity, catalytic activity;P:unknown;C:unknown;MPOFBVA C.G. S.X.
0.02 3e-2 40 At3g04460 819602 PEX12 RING finger protein involved in peroxisome biogenesis. C.G. S.X.
0.01 1e-1 38 At1g16780 838249 vacuolar-type H+-translocating inorganic pyrophosphatase, putative F:inorganic diphosphatase activity, hydrogen-translocating pyrophosphatase activity;P:proton transport;C:vacuole;OBPAM C.G. S.X.
0.08 1e-1 38 At1g43900 840989 protein phosphatase 2C, putative / PP2C, putative F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOBFVA C.G. S.X.
0.07 5e-1 36 At5g53140 835395 protein phosphatase 2C, putative / PP2C, putative F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;OMBPFVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.37 2e-93 343 Glycine max Gma.10933.5.S1_at AW310411 - - 7e-122 At4g31750 WIN2 (HOPW1-1-INTERACTING 2) C.G. S.X.
0.14 8e-17 87 Hordeum vulgare Contig2995_at Contig2995 - - 4e-24 At4g31750 WIN2 (HOPW1-1-INTERACTING 2) C.G. S.X.
0.21 7e-8 59 Oryza sativa Os06g0698300 AK071637.1 - Protein phosphatase 2C family protein 5e-14 At4g31750 WIN2 (HOPW1-1-INTERACTING 2) C.G. S.X.
0.41 5e-76 286 Populus trichocarpa PtpAffx.206852.1.S1_at pmrna13612 hypothetical protein - 3e-136 At4g31750 WIN2 (HOPW1-1-INTERACTING 2) C.G. S.X.
0.13 4e-2 40 Triticum aestivum Ta.23679.1.S1_at BQ807036 protein phosphatase 2C - 7e-7 At4g31750 WIN2 (HOPW1-1-INTERACTING 2) C.G. S.X.
0.23 6e-32 137 Vitis vinifera 1613206_at CF516257 - - 7e-86 At4g31750 WIN2 (HOPW1-1-INTERACTING 2) C.G. S.X.
0.22 4e-15 81 Zea mays Zm.1697.1.S1_at AY621066.1 Protein phosphatase 2C - 5e-33 At4g31750 WIN2 (HOPW1-1-INTERACTING 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006470 The process of removing one or more phosphoric residues from a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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