Gene omics information

Query gene ID At5g10550
Gene name GTE2 (Global transcription factor group E 2)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g10550830920GTE2 (Global transcription factor group E 2)This gene is predicted to encode a bromodomain-containing protein. A plant line expressing RNAi constructs targeted against GTE7 shows some resistance to agrobacterium-mediated root transformation.S.X.H.G.
0.6075.7At4g03430827925EMB2770 (EMBRYO DEFECTIVE 2770)Encodes a nuclear protein similar to the human U5 small ribonucleoprotein-associated 102-kD protein and to the yeast pre-mRNA splicing factors Prp1p and Prp6p. STA1 expression is upregulated by cold stress, and the sta1-1 mutant is defective in the splicing of the cold-induced COR15A gene. Luciferase imaging was used to isolate a recessive mutant, sta1-1, with enhanced stability of the normally unstable luciferase transcript. This mutation also causes the stabilization of some endogenous gene transcripts and has a range of developmental and stress response phenotypes.S.X.H.G.
0.3338.1At5g65630836689GTE7 (Global transcription factor group E 7)This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation.S.X.H.G.
0.020.4At1g02090839241FUS5 (FUSCA 5)encodes a phosphoprotein that is a subunit of the COP9 signalosome. Mutants exhibit constitutive photomorphogenic phenotype.S.X.H.G.
0.010.2At5g67320836867HOS15 (high expression of osmotically responsive genes 15)Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing.S.X.H.G.
0.000.0At2g26140817154ftsh4 (FtsH protease 4)encodes an FtsH protease that is localized to the mitochondrionS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
110.699.9E-MEXP-98-raw-cel-320188969
102.899.9E-MEXP-98-raw-cel-320188749
84.299.9E-MEXP-98-raw-cel-320188694
50.899.8GSM284398Arabidopsis GGSc2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
47.299.8E-MEXP-98-raw-cel-320188914
35.899.7E-MEXP-98-raw-cel-320189079
33.099.7E-MEXP-1725-raw-cel-1669614623
32.899.7E-MEXP-1725-raw-cel-1669614582
31.199.7GSM284397Arabidopsis GGSc1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
29.499.7E-MEXP-1725-raw-cel-1669614634
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.514e-102373At5g65630836689GTE7 (Global transcription factor group E 7)This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation.C.G.S.X.
0.023e-138At3g19070821441cell wall protein-relatedF:transcription factor activity;P:regulation of transcription;C:unknown;OMFPBVAC.G.S.X.
0.023e-138At3g12710820453methyladenine glycosylase family proteinF:DNA-3-methyladenine glycosylase I activity, catalytic activity;P:DNA repair, base-excision repair;C:unknown;BOPAMC.G.S.X.
0.013e-138At1g17790838357DNA-binding bromodomain-containing proteinF:DNA binding;P:biological_process unknown;C:chloroplast;MOFBPVAC.G.S.X.
0.013e-138At1g02990839380-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPVAC.G.S.X.
0.011e+036At5g53170835398FTSH11 (FtsH protease 11)encodes an FtsH protease that is localized to the chloroplast and the mitochondrionC.G.S.X.
0.011e+036At4g21910828280MATE efflux family proteinF:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFAMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-242Glycine maxGma.12910.1.A1_atCD395240--5e-3At5g10550GTE2 (Global transcription factor group E 2)C.G.S.X.
0.022e+034Hordeum vulgareHV_CEa0007M14r2_atHV_CEa0007M14r2--3e+0At5g63740zinc finger protein-relatedC.G.S.X.
0.011e-140Oryza sativaOs07g0118300AU222757-Conserved hypothetical protein3e-5At4g33625unknown proteinC.G.S.X.
0.034e-448Populus trichocarpaPtpAffx.101445.1.S1_atCV264873global transcription factor group /// hypothetical protein-1e-4At5g10550GTE2 (Global transcription factor group E 2)C.G.S.X.
0.022e-242Triticum aestivumTaAffx.107491.1.S1_atCA699093--1e+0At5g08410FTRA2 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 2)C.G.S.X.
0.025e-342Vitis vinifera1621761_atCD714920hypothetical protein LOC100257129-5e-3At5g65630GTE7 (Global transcription factor group E 7)C.G.S.X.
0.064e-136Zea maysZm.12242.1.A1_atBM080779--1e-2At1g73150GTE3 (GLOBAL TRANSCRIPTION FACTOR GROUP E 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009294The introduction and uptake of foreign genetic material (DNA or RNA) into a cell, and often the expression of that genetic material.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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