Gene omics information

Query gene ID At5g10100
Gene name trehalose-6-phosphate phosphatase, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At5g10100830874trehalose-6-phosphate phosphatase, putativeF:catalytic activity, trehalose-phosphatase activity;P:trehalose biosynthetic process, metabolic process;C:chloroplast;BPMOFAS.X.H.G.
0.4457.2At1g60470842342AtGolS4 (Arabidopsis thaliana galactinol synthase 4)F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:cellular_component unknown;PMFVBOS.X.H.G.
0.4050.8At5g40010833998AATP1 (AAA-ATPase 1)F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;OMBFPAVS.X.H.G.
0.2726.2At3g48510824010unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.114.1At5g66700836803HB53Encodes a homeodomain protein. Member of HD-ZIP 1 family, most closely related to HB5. AtHB53 is auxin-inducible and its induction is inhibited by cytokinin, especially in roots therefore may be involved in root development.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
348.0100.0GSM131278AtGen_6-1522_Cold(4°C)-Roots-12.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)
205.0100.0GSM131277AtGen_6-1521_Cold(4°C)-Roots-12.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)
193.6100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
182.3100.0GSM131281AtGen_6-1621_Cold(4°C)-Roots-24.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)
140.899.9GSM131282AtGen_6-1622_Cold(4°C)-Roots-24.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)
133.899.9E-MEXP-828-raw-cel-1156922684
115.699.9GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
105.899.9GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
105.899.9GSM131465AtGen_6-9521_Heatstress(3h)+9hrecovery-Roots-12.0h_Rep1GSE5628AtGenExpress: Stress Treatments (Heat stress)
91.599.9GSM131466AtGen_6-9522_Heatstress(3h)+9hrecovery-Roots-12.0h_Rep2GSE5628AtGenExpress: Stress Treatments (Heat stress)
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.653e-147521At5g65140836638trehalose-6-phosphate phosphatase, putativeF:catalytic activity, trehalose-phosphatase activity;P:response to cadmium ion, trehalose biosynthetic process;C:unknown;BPMOFAC.G.S.X.
0.363e-39163At4g39770830135trehalose-6-phosphate phosphatase, putativeF:catalytic activity, trehalose-phosphatase activity;P:trehalose biosynthetic process, metabolic process;C:cellular_component unknown;BPMOFAC.G.S.X.
0.363e-27123At2g22190816753catalytic/ trehalose-phosphataseF:catalytic activity, trehalose-phosphatase activity;P:trehalose biosynthetic process, metabolic process;C:cellular_component unknown;BPMOFAC.G.S.X.
0.133e-1583At1g78090844144ATTPPB (TREHALOSE-6-PHOSPHATE PHOSPHATASE)homologous to the C-terminal part of microbial trehalose-6-phosphate phosphatasesC.G.S.X.
0.102e-963At1g35910840493trehalose-6-phosphate phosphatase, putativeF:catalytic activity, trehalose-phosphatase activity;P:trehalose biosynthetic process, metabolic process;C:unknown;BPMOFAC.G.S.X.
0.129e-652At5g51460835220ATTPPAhomologous to the C-terminal part of microbial trehalose-6-phosphate phosphatasesC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.266e-1789Glycine maxGmaAffx.1301.21.S1_atCD410043--7e-18At2g22190catalytic/ trehalose-phosphataseC.G.S.X.
0.077e-238Hordeum vulgareContig15118_atContig15118--7e-4At1g22210trehalose-6-phosphate phosphatase, putativeC.G.S.X.
0.062e-242Oryza sativaOs06g0222100NM_189040.1-Trehalose-phosphatase family protein9e+0At5g05030unknown proteinC.G.S.X.
0.296e-23109Populus trichocarpaPtpAffx.205187.1.S1_atpmrna10271hypothetical protein-5e-32At5g65140trehalose-6-phosphate phosphatase, putativeC.G.S.X.
0.071e-138Triticum aestivumTaAffx.112809.1.S1_atCA620727--2e-5At1g78090ATTPPB (TREHALOSE-6-PHOSPHATE PHOSPHATASE)C.G.S.X.
0.282e-1685Vitis vinifera1621464_atCD715384--4e-16At5g10100trehalose-6-phosphate phosphatase, putativeC.G.S.X.
0.041e-344Zea maysZm.19253.1.S1_atCO526011ramosa3-1e-3At1g35910trehalose-6-phosphate phosphatase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0005992The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi.
LGO:0008152The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00099Link to KaPPA-View 4Trehalose metabolism



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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