Gene omics information

Query gene ID At5g09640
Gene name SCPL19
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4862.5At5g09640830823SCPL19encodes a serine carboxypeptidase-like (SCPL) protein. Mutants accumulate sinapoylglucose instead of sinapoylcholine, and have increased levels of choline and decreased activity of the enzyme sinapoylglucose:choline sinapoyltransferase.S.X.H.G.
0.9195.6At5g07500830642PEI1Encodes an embryo-specific zinc finger transcription factor required for heart-stage embryo formation.S.X.H.G.
0.8994.6At1g18100838390E12A11E12A11 protein (E12A11)S.X.H.G.
0.8994.6At1g65880842900BZO1 (BENZOYLOXYGLUCOSINOLATE 1)Encodes a benzoate-CoA ligase. Involved in the biosynthesis of benzoyloxyglucosinolate in Arabidopsis seeds.S.X.H.G.
0.8994.6At4g25980828704cationic peroxidase, putativeF:peroxidase activity;P:response to oxidative stress;C:endomembrane system;PFOMS.X.H.G.
0.7788.0At4g34520829603KCS18Encodes KCS18, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
362.5100.0GSM131697ATGE_81_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
341.2100.0GSM131699ATGE_81_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
325.9100.0GSM131698ATGE_81_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
315.4100.0GSM131695ATGE_79_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
283.6100.0GSM131696ATGE_79_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
272.5100.0GSM131694ATGE_79_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.133e-1583At3g12203820399scpl17 (serine carboxypeptidase-like 17)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOBC.G.S.X.
0.152e-1377At1g73300843664scpl2 (serine carboxypeptidase-like 2)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBOC.G.S.X.
0.163e-1273At5g36180833615scpl1 (serine carboxypeptidase-like 1)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBOC.G.S.X.
0.171e-1171At1g73270843661scpl6 (serine carboxypeptidase-like 6)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBOC.G.S.X.
0.131e-1171At1g73280843662scpl3 (serine carboxypeptidase-like 3)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBOC.G.S.X.
0.105e-1169At3g12240820404SCPL15 (serine carboxypeptidase-like 15)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOBC.G.S.X.
0.105e-1169At1g73290843663scpl5 (serine carboxypeptidase-like 5)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBOC.G.S.X.
0.172e-1067At3g10450820209SCPL7 (SERINE CARBOXYPEPTIDASE-LIKE 7)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBOC.G.S.X.
0.133e-963At2g22920816823serine carboxypeptidase S10 family proteinF:serine-type carboxypeptidase activity;P:proteolysis;C:plant-type cell wall;PMFBOC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.114e-654Glycine maxGma.2669.1.S1_atCA935964--4e-6At5g09640SCPL19C.G.S.X.
0.035e-342Hordeum vulgarerbaal4l02_atrbaal4l02--6e-3At5g09640SCPL19C.G.S.X.
0.044e-448Oryza sativaOs11g04313009639.m02147-Peptidase S10, serine carboxypeptidase familyprotein6e-5At5g09640SCPL19C.G.S.X.
0.102e-1171Populus trichocarpaPtpAffx.221260.1.S1_atpmrna38018--5e-13At3g10450SCPL7 (SERINE CARBOXYPEPTIDASE-LIKE 7)C.G.S.X.
0.037e-136Triticum aestivumTaAffx.43855.1.S1_atBE492137--2e-1At5g09640SCPL19C.G.S.X.
0.066e-1167Vitis vinifera1607463_atCB343440hypothetical protein LOC100255717-1e-12At3g12203scpl17 (serine carboxypeptidase-like 17)C.G.S.X.
0.021e+034Zea maysZm.8767.2.A1_a_atBM351177--6e+0At3g12510unknown proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0019748The chemical reactions and pathways resulting in many of the chemical changes of compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon. In multicellular organisms secondary metabolism is generally carried out in specific cell types, and may be useful for the organism as a whole. In unicellular organisms, secondary metabolism is often used for the production of antibiotics or for the utilization and acquisition of unusual nutrients.
CGO:0006508The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with the hydrolysis of peptide bonds.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

00940Link to KEGG PATHWAYPhenylpropanoid biosynthesis
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