Gene omics information

Query gene ID At5g09440
Gene name EXL4 (EXORDIUM LIKE 4)
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2726.2At5g09440830803EXL4 (EXORDIUM LIKE 4)F:molecular_function unknown;P:biological_process unknown;C:membrane;PBS.X.H.G.
0.4253.9At3g48970824058copper-binding family proteinF:copper ion binding, metal ion binding;P:copper ion transport, metal ion transport;C:unknown;PBOS.X.H.G.
0.4050.8At2g34500818013CYP710A1 (cytochrome P450, family 710, subfamily A, polypeptide 1)Encodes a protein with C22-sterol desaturase activity. The enzyme was shown to catalyze in the presence of NADPH the conversion of β-sitosterol to stigmasterol, but not that of 24-epi-campesterol to brassicasterol (unlike CYP710A2).S.X.H.G.
0.3846.7At1g27670839659unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.2930.3At2g37130818289peroxidase 21 (PER21) (P21) (PRXR5)F:electron carrier activity, peroxidase activity, heme binding;P:defense response to fungus;C:endomembrane system;PFOS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
42.099.8GSM131207AtGen_D-41_3-DS_REP3_ATH1GSE5617AtGenExpress: Light treatments
41.499.8GSM131187AtGen_D-20_2-RL_REP2_ATH1GSE5617AtGenExpress: Light treatments
40.199.8GSM131192AtGen_D-25_2-DS_REP2_ATH1GSE5617AtGenExpress: Light treatments
40.199.8GSM131213AtGen_D-47_3-US_REP3_ATH1GSE5617AtGenExpress: Light treatments
38.699.8GSM131169AtGen_D-1_1-DL_REP1_ATH1GSE5617AtGenExpress: Light treatments
38.199.8GSM131202AtGen_D-36_3-RL_REP3_ATH1GSE5617AtGenExpress: Light treatments
38.099.8GSM131214AtGen_D-48_3-WS_REP3_ATH1GSE5617AtGenExpress: Light treatments
37.999.8GSM131199AtGen_D-33_3-DL_REP3_ATH1GSE5617AtGenExpress: Light treatments
37.799.7GSM131196AtGen_D-30_2-AS_REP2_ATH1GSE5617AtGenExpress: Light treatments
37.599.7GSM131211AtGen_D-45_3-BS_REP3_ATH1GSE5617AtGenExpress: Light treatments
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.667e-37155At5g64260836547EXL2 (EXORDIUM LIKE 2)F:molecular_function unknown;P:biological_process unknown;C:cell wall, plant-type cell wall;PBC.G.S.X.
0.051e-448At4g08950826473EXO (EXORDIUM)F:molecular_function unknown;P:response to brassinosteroid stimulus;C:cell wall, plant-type cell wall;PBC.G.S.X.
0.032e+034At5g25240832595-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.022e+034At1g05805837090basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:cytosol;PMOFBAC.G.S.X.
0.032e+034At1g35140840399PHI-1 (PHOSPHATE-INDUCED 1)At1g35140 (At1g35140/T32G9_32) mRNA, complete cdsC.G.S.X.
0.022e+034At1g31510840041F-box family protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.026e+032At5g59290836047UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE 3)Encodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be cytosolic by PSORT. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.C.G.S.X.
0.016e+032At5g13260831167unknown proteinF:unknown;P:biological_process unknown;C:unknown;MFOPBAVC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.253e-963Glycine maxGma.3799.2.S1_s_atAW348702--3e-9At5g09440EXL4 (EXORDIUM LIKE 4)C.G.S.X.
0.048e-134Hordeum vulgareContig9813_atContig9813--6e-1At4g08950EXO (EXORDIUM)C.G.S.X.
0.033e+034Oryza sativaOsAffx.14108.1.S1_at---0C.G.S.X.
0.102e-654Populus trichocarpaPtp.4845.1.S1_atCV274138hypothetical protein-6e-10At5g64260EXL2 (EXORDIUM LIKE 2)C.G.S.X.
0.034e-136Triticum aestivumTaAffx.24851.1.S1_atCA711013--2e-1At1g64500glutaredoxin family proteinC.G.S.X.
0.113e-857Vitis vinifera1621829_atCF608402hypothetical protein LOC100242154-8e-8At5g09440EXL4 (EXORDIUM LIKE 4)C.G.S.X.
0.053e-342Zea maysZm.10093.1.A1_atCO526593--4e-8At5g64260EXL2 (EXORDIUM LIKE 2)C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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