Gene omics information

Query gene ID At5g08100
Gene name L-asparaginase / L-asparagine amidohydrolase
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g08100830704L-asparaginase / L-asparagine amidohydrolaseF:asparaginase activity;P:glycoprotein catabolic process;C:cellular_component unknown;BOMFPAS.X.H.G.
0.3338.1At5g18580831976FASS (FASS 1)fass mutants have aberrant cell shapes due to defects in arrangement of cortical microtubules. Encodes a protein highly conserved in higher plants and similar in its C-terminal part to B' regulatory subunits of type 2A protein phosphatases. Interacts with an Arabidopsis type A subunit of PP2A in the yeast two-hybrid system.S.X.H.G.
0.3235.7At1g55130841956endomembrane protein 70, putativeF:unknown;P:unknown;C:integral to membrane, Golgi apparatus;MPOFBS.X.H.G.
0.2624.4At1g21710838775OGG1 (8-OXOGUANINE-DNA GLYCOSYLASE 1)Encodes 8-oxoguanine-DNA glycosylase. DNA repair enzyme.S.X.H.G.
0.2319.3At5g47750834826D6PKL2 (D6 PROTEIN KINASE LIKE 2)F:kinase activity;P:protein amino acid phosphorylation;C:nucleolus, nucleus, cytoplasm;MOPFBVAS.X.H.G.
0.2319.3At4g02610828226tryptophan synthase, alpha subunit, putativeF:tryptophan synthase activity;P:tryptophan biosynthetic process;C:chloroplast;BOAFPMS.X.H.G.
0.2319.3At1g73720843707transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MFOBPAVS.X.H.G.
0.2319.3At5g61840836306GUT1F:glucuronoxylan glucuronosyltransferase activity, catalytic activity;P:secondary cell wall biogenesis, glucuronoxylan biosynthetic process;C:Golgi apparatus, membrane;PMOBFS.X.H.G.
0.2319.3At4g02680828205EOL1 (ETO1-LIKE 1)Encodes a paralog of ETO1, which is a negative regulator of ACS5 (a key enzyme in ethylene biosynthesis pathway). EOL1 also interacts with and inhibits the activity of ACS5.S.X.H.G.
0.2217.5At3g51310824294VPS35C (VPS35 HOMOLOG C)Homolog of yeast retromer subunit VPS35. Part of a retromer-like protein complex involved in endosome to lysosome protein transport.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
26.799.7GSM133960Fukuda_1-5_4A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
26.699.7GSM242958Mock day 3 (day3E2)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
25.299.6GSM133961Fukuda_1-6_4B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
24.399.6GSM242959Steroid day 3 (day3D1)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
23.899.6GSM242954Mock day 1 (day1E2)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
21.499.6GSM242956Steroid day 1 (day1D2)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
21.199.6GSM242955Steroid day 1 (day1D1)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
20.899.6GSM242957Mock day 3 (day3E1)GSE9605Target genes of AGAMOUS during early flower development in Arabidopsis
20.499.6GSM133963Fukuda_1-8_6B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
17.799.5GSM133966Fukuda_1-11_10A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.031e-138At3g16150820860L-asparaginase, putative / L-asparagine amidohydrolase, putativeF:asparaginase activity;P:glycoprotein catabolic process;C:cellular_component unknown;BOMFPAC.G.S.X.
0.015e-136At5g01680831698ATCHX26member of Putative Na+/H+ antiporter familyC.G.S.X.
0.025e-136At1g30670839947basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PBFC.G.S.X.
0.012e+034At5g15070831359acid phosphatase/ oxidoreductase/ transition metal ion bindingF:oxidoreductase activity, transition metal ion binding, acid phosphatase activity;P:unknown;C:cellular_component unknown;MFOPBC.G.S.X.
0.012e+034At4g02350828060exocyst complex subunit Sec15-like family proteinF:molecular_function unknown;P:pollen germination, pollen tube growth;C:plasma membrane, membrane, exocyst;MFPOC.G.S.X.
0.012e+034At4g20910827839HEN1 (HUA ENHANCER 1)Encodes an enhancer of hua1 and hua2 tha acts to specify reproductive organ identities and to repress A gene function. HEN1 also shares AG's non-homeotic function in controlling floral determinacy. Mutants display corymb-like inflorescences. HEN1 is a methyltransferase that methylates miRNAs and siRNAs on the ribose of the last nucleotide. The 3'-end methylation probably protects the 3' ends of the small RNAs from uridylation.C.G.S.X.
0.012e+034At3g47910823946ubiquitin thiolesterase/ zinc ion bindingF:ubiquitin thiolesterase activity, zinc ion binding;P:ubiquitin-dependent protein catabolic process;C:intracellular;MOFPBAVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.053e+034Glycine maxGma.12931.1.S1_atCD396295--1e+0At5g08100L-asparaginase / L-asparagine amidohydrolaseC.G.S.X.
0.024e+032Hordeum vulgareContig25169_atContig25169--4e+0At4g32590ferredoxin-relatedC.G.S.X.
0.036e-240Oryza sativaOs03g0597600AK069458.1-L-asparaginase (EC 3.5.1.1) (L-asparagineamidohydrolase)4e-2At5g08100L-asparaginase / L-asparagine amidohydrolaseC.G.S.X.
0.153e-24113Populus trichocarpaPtpAffx.1665.1.S1_atCK087467hypothetical protein-3e-24At5g08100L-asparaginase / L-asparagine amidohydrolaseC.G.S.X.
0.038e+032Triticum aestivumTaAffx.86421.1.S1_atCA608699--1e+0At1g04171unknown proteinC.G.S.X.
0.257e-22103Vitis vinifera1611257_a_atCB976439hypothetical protein LOC100250923-3e-21At5g08100L-asparaginase / L-asparagine amidohydrolaseC.G.S.X.
0.033e+032Zea maysZm.2814.1.A1_atCB833930zinc finger C-x8-C-x5-C-x3-H type family protein-3e+0At5g08100L-asparaginase / L-asparagine amidohydrolaseC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006516The chemical reactions and pathways resulting in the breakdown of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00011Link to KaPPA-View 4Aspartate and asparagine metabolism



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00250Link to KEGG PATHWAYAlanine, aspartate and glutamate metabolism
00460Link to KEGG PATHWAYCyanoamino acid metabolism
00910Link to KEGG PATHWAYNitrogen metabolism
01100Link to KEGG PATHWAYMetabolic pathways
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