Gene omics information

Query gene ID At5g08050
Gene name -
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g08050830699-F:molecular_function unknown;P:biological_process unknown;C:thylakoid, chloroplast thylakoid membrane, chloroplast;POS.X.H.G.
0.8089.8At1g74730843812unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast;POS.X.H.G.
0.6378.1At3g04790819639ribose 5-phosphate isomerase-relatedF:ribose-5-phosphate isomerase activity;P:defense response to bacterium, reductive pentose-phosphate cycle;C:thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope;BOAFMPS.X.H.G.
0.5974.7At5g07020830593proline-rich family proteinF:molecular_function unknown;P:biological_process unknown;C:thylakoid, chloroplast thylakoid membrane, chloroplast;PMFVOS.X.H.G.
0.4761.2At4g34190829567SEP1 (STRESS ENHANCED PROTEIN 1)Encodes a stress enhanced protein that localizes to the thylakoid membrane and whose mRNA is upregulated in response to high light intensity. It may be involved in chlorophyll binding.S.X.H.G.
0.3846.7At4g09650826551ATPD (ATP SYNTHASE DELTA-SUBUNIT GENE)Encodes the chloroplast ATPase delta-subunit.S.X.H.G.
0.3133.8At5g511108351854-alpha-hydroxytetrahydrobiopterin dehydrataseF:4-alpha-hydroxytetrahydrobiopterin dehydratase activity;P:tetrahydrobiopterin biosynthetic process;C:chloroplast;OBPAFS.X.H.G.
0.2420.7At4g25050828608ACP4 (acyl carrier protein 4)encodes an acyl carrier protein predominantly expressed in leaves. Gene expression is upregulated by light.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.799.4GSM268008Col-0, Time 0, rep-AGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutant
11.999.3GSM268009Col-0, Time 0, rep-BGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutant
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.042e-136At5g41765834181unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.012e-136At4g25520828657SLK1 (SEUSS-LIKE 1)F:transcription regulator activity;P:unknown;C:unknown;OMFPBVC.G.S.X.
0.019e-134At5g45720834611ATP binding / DNA binding / DNA-directed DNA polymerase/ nucleoside-triphosphatase/ nucleotide bindingF:nucleoside-triphosphatase activity, DNA binding, DNA-directed DNA polymerase activity, nucleotide binding, ATP binding;P:DNA replication;C:DNA polymerase III complex;OBMFAPVC.G.S.X.
0.029e-134At5g36230833620eIF4-gamma/eIF5/eIF2-epsilon domain-containing proteinF:binding, translation initiation factor activity;P:regulation of translational initiation;C:membrane;MPFOVC.G.S.X.
0.019e-134At4g30560829179ATCNGC9 (CYCLIC NUCLEOTIDE GATED CHANNEL 9)member of Cyclic nucleotide gated channel familyC.G.S.X.
0.029e-134At3g56120824778Met-10+ like family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;AMOFBPC.G.S.X.
0.019e-134At1g72250843557kinesin motor protein-relatedF:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex;MOFPBVAC.G.S.X.
0.019e-134At1g29740839852kinaseF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.051e+034Glycine maxHgAffx.17182.1.S1_atCB279174--7e-4At3g62940OTU-like cysteine protease family proteinC.G.S.X.
0.041e-136Hordeum vulgareContig17598_atContig17598--3e-1At5g08050-C.G.S.X.
0.052e+034Oryza sativaOsAffx.9026.1.S1_at---0C.G.S.X.
0.113e-136Populus trichocarpaPtpAffx.1263.1.A1_a_atCV237429hypothetical protein-4e-1At5g08050-C.G.S.X.
0.044e+032Triticum aestivumTaAffx.112543.1.S1_atCA623124--2e-1At1g49400emb1129 (embryo defective 1129)C.G.S.X.
0.061e-342Vitis vinifera1607453_atCA814565hypothetical protein LOC100243309-6e-3At5g08050-C.G.S.X.
0.032e+032Zea maysZm.5036.1.A1_atBM349765--5e+0At5g08050-C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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