Gene omics information

Query gene ID At5g08000
Gene name E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g08000830694E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3)Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and binds callose.S.X.H.G.
0.8693.1At4g29030829024glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVAS.X.H.G.
0.6781.6At4g37750829931ANT (AINTEGUMENTA)ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed specifically in the chalaza and in floral organ primordia.S.X.H.G.
0.4659.8At3g61310825303DNA-binding family proteinF:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMFOBS.X.H.G.
0.3338.1At4g03210828024XTH9 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 9)encodes a member of xyloglucan endotransglucosylase/hydrolases (XTHs) that catalyze the cleavage and molecular grafting of xyloglucan chains function in loosening and rearrangement of the cell wall. Gene is expressed in shoot apex region, flower buds, flower stalks and internodes bearing flowers.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
39.399.8E-MEXP-728-raw-cel-1062074684
36.699.7E-MEXP-728-raw-cel-1062074608
36.599.7E-MEXP-728-raw-cel-1062074512
33.699.7E-MEXP-728-raw-cel-1062074758
32.699.7E-MEXP-728-raw-cel-1062074089
32.599.7E-MEXP-728-raw-cel-1062074577
32.399.7E-MEXP-728-raw-cel-1062074653
32.199.7E-MEXP-728-raw-cel-1062073942
31.399.7E-MEXP-728-raw-cel-1062074718
29.399.7E-MEXP-728-raw-cel-1062074155
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.426e-61234At5g61130836234PDCB1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1)Encodes a plasmodesmatal localized protein with callose binding activity. The function of PDCB1 is unknown but overexpression leads to the hyperaccumulation of callose.C.G.S.X.
0.072e-859At1g69295843261PDCB4 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4)Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.C.G.S.X.
0.033e-136At1g78140844150methyltransferase-relatedF:methyltransferase activity;P:metabolic process;C:chloroplast, plastoglobule;BOAPFMC.G.S.X.
0.021e+034At2g44550819063AtGH9B10 (Arabidopsis thaliana glycosyl hydrolase 9B10)F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOFC.G.S.X.
0.051e+034At1g18650838446PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3)Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.C.G.S.X.
0.014e+032At5g64580836579AAA-type ATPase family proteinF:nucleoside-triphosphatase activity, metalloendopeptidase activity, nucleotide binding, zinc ion binding, ATP binding;P:unknown;C:chloroplast, chloroplast envelope;BOMFPAVC.G.S.X.
0.024e+032At5g43660834386iron ion binding / oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donorsF:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, iron ion binding;P:protein metabolic process;C:cellular_component unknown;MPBOC.G.S.X.
0.014e+032At5g61690836291ATATH15member of ATH subfamilyC.G.S.X.
0.014e+032At5g42400834246SDG25 (SET DOMAIN PROTEIN 25)F:unknown;P:unknown;C:unknown;MOPFBAVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.114e-136Glycine maxGmaAffx.3710.1.S1_atBE821862--4e-1At5g08000E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3)C.G.S.X.
0.036e-134Hordeum vulgareContig9414_atContig9414--1e+0At5g08000E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3)C.G.S.X.
0.026e-136Oryza sativaOs12g0606900AK072659.1-Hypothetical protein2e+0At5g19151unknown proteinC.G.S.X.
0.111e-448Populus trichocarpaPtp.4302.1.S1_s_atCX173302hypothetical protein-9e-2At5g08000E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3)C.G.S.X.
0.042e+130Triticum aestivumTaAffx.55948.1.S1_s_atCA659131--5e-1At5g48700ubiquitin-relatedC.G.S.X.
0.053e-134Vitis vinifera1620761_atCF212336hypothetical protein LOC100242217-2e+0At5g08000E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3)C.G.S.X.
0.022e+032Zea maysZm.15428.1.A1_atAY104659.1--2e-1At4g32340-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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