CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g07870

Gene name transferase family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.15 7.8 At5g07870 830680 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO S.X. H.G.
0.44 57.2 At5g59510 836070 RTFL5 (ROTUNDIFOLIA LIKE 5) F:molecular_function unknown;P:shoot development;C:cellular_component unknown;PMFOB S.X. H.G.
0.25 22.6 At2g15480 816040 UGT73B5 (UDP-glucosyl transferase 73B5) F:quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups;P:response to other organism;C:endomembrane system;PMVBOF S.X. H.G.
0.22 17.5 At1g62300 842527 WRKY6 transcription factor WRKY6 (WRKY6) S.X. H.G.
0.11 4.1 At1g17170 838288 ATGSTU24 (GLUTATHIONE S-TRANSFERASE TAU 24) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
198.5 100.0 GSM133968 Birnbaum_1-19_LRC-1_Rep1_ATH1 GSE5749 A gene expression map of the Arabidopsis root
182.8 100.0 GSM184912 Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 3 GSE7641 Expression analysis of root cell-types after treatment with salt
151.7 99.9 GSM133970 Birnbaum_1-21_LRC-3_Rep3_ATH1 GSE5749 A gene expression map of the Arabidopsis root
147.5 99.9 GSM133969 Birnbaum_1-20_LRC-2_Rep2_ATH1 GSE5749 A gene expression map of the Arabidopsis root
134.3 99.9 GSM133973 Birnbaum_1-3_src5-3_Rep3_ATH1 GSE5749 A gene expression map of the Arabidopsis root
106.9 99.9 GSM25870 B Treated - 1 GSE1491 Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
103.7 99.9 GSM25873 IAA/A Treated - 1 GSE1491 Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
99.6 99.9 GSM25866 A Treated - 1 GSE1491 Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
95.8 99.9 GSM25871 B Treated - 2 GSE1491 Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
89.7 99.9 GSM25876 IAA/B Treated - 1 GSE1491 Identification of Inhibitors of Auxin Transcriptional Activation via Chemical Genetics in Arabidopsis
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.86 0 835 At5g07860 830679 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO C.G. S.X.
0.60 5e-79 295 At5g07850 830678 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO C.G. S.X.
0.23 3e-31 137 At5g42830 834294 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF C.G. S.X.
0.03 2e-1 38 At5g01210 831901 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFB C.G. S.X.
0.01 7e-1 36 At5g13150 831154 ATEXO70C1 (exocyst subunit EXO70 family protein C1) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. C.G. S.X.
0.02 7e-1 36 At4g01610 826792 cathepsin B-like cysteine protease, putative F:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis, regulation of catalytic activity;C:vacuole;MOPVBAF C.G. S.X.
0.01 7e-1 36 At4g31540 829281 ATEXO70G1 (exocyst subunit EXO70 family protein G1) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. C.G. S.X.
0.03 7e-1 36 At3g20450 821590 - F:molecular_function unknown;P:intracellular protein transport;C:endomembrane system, integral to membrane, endoplasmic reticulum;P C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 6e-2 40 Glycine max GmaAffx.25321.1.S1_at AW568561 - - 3e-2 At5g07850 transferase family protein C.G. S.X.
0.02 1e+0 34 Hordeum vulgare HU14I20u_at HU14I20u - - 1e+0 At5g41765 unknown protein C.G. S.X.
0.01 5e+0 34 Oryza sativa Os02g0706600 9630.m04651 - ZF-HD homeobox protein Cys/His-rich dimerisationregion domain containing protein 2e-3 At1g69600 ZFHD1 (ZINC FINGER HOMEODOMAIN 1) C.G. S.X.
0.03 1e+0 36 Populus trichocarpa PtpAffx.221194.1.S1_x_at pmrna37884 hypothetical protein - 1e-2 At5g42830 transferase family protein C.G. S.X.
0.02 7e-1 36 Triticum aestivum Ta.17098.1.S1_at CA617775 - - 2e+0 At3g04200 germin-like protein, putative C.G. S.X.
0.02 8e-1 34 Vitis vinifera 1619853_at BM437498 similar to SWIB complex BAF60b domain-containing protein - 5e-31 At4g26810 SWIB complex BAF60b domain-containing protein C.G. S.X.
0.02 1e+0 34 Zea mays ZmAffx.707.1.A1_at AI738220 transposon protein - 8e-1 At5g03310 auxin-responsive family protein C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00355 Acyltransferase

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage