Gene omics information

Query gene ID At5g07830
Gene name AtGUS2 (Arabidopsis thaliana glucuronidase 2)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3338.1At5g07830830676AtGUS2 (Arabidopsis thaliana glucuronidase 2)Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-β-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be membrane-associated.S.X.H.G.
0.7687.4At1g06230837133GTE4 (GLOBAL TRANSCRIPTION FACTOR GROUP E 4)This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE4 show some resistance to agrobacterium-mediated root transformation.S.X.H.G.
0.7083.5At5g04540830333phosphatase/ protein tyrosine phosphataseF:phosphatase activity, protein tyrosine phosphatase activity;P:dephosphorylation;C:unknown;MOFPS.X.H.G.
0.6075.7At1g03970839356GBF4encodes a basic leucine zipper G-box binding factor that can bind to G-box motifs only as heterodimers with GBF2 or GBF3. A single amino acid change can confer G-box binding as homodimers.S.X.H.G.
0.6075.7At3g17250820986protein phosphatase 2C-related / PP2C-relatedF:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOFBVAS.X.H.G.
0.5974.7At4g32350829369unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFBVS.X.H.G.
0.5974.7At5g14960831348DEL2 (DP-E2F-LIKE 2)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;MPOFS.X.H.G.
0.5873.8At5g40710834071zinc finger (C2H2 type) family proteinF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:endomembrane system, intracellular;MPOBFS.X.H.G.
0.5267.4At2g24640817000UBP19 (UBIQUITIN-SPECIFIC PROTEASE 19)F:cysteine-type endopeptidase activity, ubiquitin thiolesterase activity;P:ubiquitin-dependent protein catabolic process;C:endomembrane system;MOFPBVAS.X.H.G.
0.4963.5At2g26990817241FUS12 (FUSCA 12)Represses photomorphogenesis and induces skotomorphogenesis in the dark.S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
151.099.9GSM311279Laser capture microdissected (LCM) chalazal endosperm at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
143.499.9GSM311280Laser capture microdissected (LCM) chalazal endosperm at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
128.599.9GSM284393Arabidopsis GCE2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
122.499.9GSM284388Arabidopsis GMPE1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
118.999.9GSM311291Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
117.699.9GSM284394Arabidopsis GCE3GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
112.499.9GSM284389Arabidopsis GMPE2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
104.499.9GSM284392Arabidopsis GCE1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
101.499.9GSM311292Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
28.599.7GSM131705ATGE_83_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.576e-57222At5g61250836246AtGUS1 (Arabidopsis thaliana glucuronidase 1)Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-β-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be secreted.C.G.S.X.
0.025e-240At4g32680829403unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PC.G.S.X.
0.015e-240At4g01970828186AtSTS (Arabidopsis thaliana stachyose synthase)Encodes a putative stachyose synthetase.C.G.S.X.
0.015e-240At2g34970818061eIF4-gamma/eIF5/eIF2-epsilon domain-containing proteinF:binding, transferase activity, translation initiation factor activity, nucleotidyltransferase activity;P:biosynthetic process, regulation of translational initiation;C:unknown;BOMAFPC.G.S.X.
0.018e-136At5g62470836367MYB96 (myb domain protein 96)Encodes a R2R3 type Myb transcription factor whose expression is strongly induced by abscisic acid.C.G.S.X.
0.018e-136At3g53240824491AtRLP45 (Receptor Like Protein 45)F:protein binding;P:signal transduction;C:unknown;PMOBFAVC.G.S.X.
0.018e-136At3g62010825374unknown proteinF:unknown;P:unknown;C:cellular_component unknown;MBOPFC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-138Glycine maxGmaAffx.91983.1.S1_s_atCF807708--9e-2At5g61250AtGUS1 (Arabidopsis thaliana glucuronidase 1)C.G.S.X.
0.073e-550Hordeum vulgareContig13120_atContig13120--3e-5At5g07830AtGUS2 (Arabidopsis thaliana glucuronidase 2)C.G.S.X.
0.051e-759Oryza sativaOs12g0578400AK060767.1-Glycoside hydrolase, family 79, N-terminal domaincontaining protein3e-4At5g61250AtGUS1 (Arabidopsis thaliana glucuronidase 1)C.G.S.X.
0.192e-20101Populus trichocarpaPtpAffx.6053.1.S1_s_atCN520953hypothetical protein-9e-21At5g07830AtGUS2 (Arabidopsis thaliana glucuronidase 2)C.G.S.X.
0.071e-242Triticum aestivumTa.4061.1.S1_atBJ283947--1e-2At5g07830AtGUS2 (Arabidopsis thaliana glucuronidase 2)C.G.S.X.
0.163e-1685Vitis vinifera1619954_atCB974333hypothetical protein LOC100257028-7e-16At5g07830AtGUS2 (Arabidopsis thaliana glucuronidase 2)C.G.S.X.
0.029e-238Zea maysZm.17827.1.A1_atCK369891retinoid-inducible serine carboxypeptidase-2e+0At2g12940UNE4 (unfertilized embryo sac 4)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00412Link to KaPPA-View 4Glycoside Hydrolase



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage