Gene omics information

Query gene ID At5g07260
Gene name homeobox protein-related
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g07260830617homeobox protein-relatedF:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
0.6781.6At3g27785822399MYB118putative transcription factor (MYB118)S.X.H.G.
0.5773.8At1g62340842532ALE1 (ABNORMAL LEAF-SHAPE 1)Subtilisin-like serine protease required for epidermal surface formation in embryos and juvenile plantsS.X.H.G.
0.4050.8At2g17750816284unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;PFBS.X.H.G.
0.114.1At4g39650830119GGT2 (GAMMA-GLUTAMYL TRANSPEPTIDASE 2)The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in the apoplast of young siliques (within the ovules of the carpel) and is involved in the degradation of glutathione. The encoded enzyme also acts as part of a GSH pumping gamma-glutamyl cycle in this tissue and may also be involved in gamma-glutamyl amino acid formation.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1123.7100.0GSM284389Arabidopsis GMPE2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
437.2100.0GSM311291Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
265.0100.0GSM311292Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
250.4100.0E-MEXP-285-raw-cel-440783213
216.0100.0E-MEXP-285-raw-cel-440783152
213.6100.0GSM284388Arabidopsis GMPE1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
136.899.9GSM131698ATGE_81_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
135.799.9GSM311289Laser capture microdissected (LCM) cellularized endosperm at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
131.099.9GSM131699ATGE_81_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
130.099.9GSM311290Laser capture microdissected (LCM) cellularized endosperm at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.072e-1067At4g26920828799-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.015e-240At4g30780829201unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
0.018e-136At3g59320825101integral membrane protein, putativeF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, membrane;OBMPFAC.G.S.X.
0.018e-136At3g55020824668RabGAP/TBC domain-containing proteinF:RAB GTPase activator activity;P:regulation of Rab GTPase activity;C:cytosol;MOFBPVAC.G.S.X.
0.018e-136At3g59310825100unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBAC.G.S.X.
0.018e-136At2g29040817452exostosin family proteinF:catalytic activity;P:biological_process unknown;C:endomembrane system, membrane;OMPFBVC.G.S.X.
0.013e+034At5g63020836422disease resistance protein (CC-NBS-LRR class), putativeF:ATP binding;P:N-terminal protein myristoylation, defense response;C:cellular_component unknown;PMBOFAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+036Glycine maxGmaAffx.52169.1.S1_atCA936562--8e+0At5g44900transmembrane receptorC.G.S.X.
0.022e+034Hordeum vulgareHD08A04r_atHD08A04r--5e-2At3g59870unknown proteinC.G.S.X.
0.022e+036Oryza sativaOsAffx.24389.1.S1_at---0C.G.S.X.
0.021e+036Populus trichocarpaPtp.3395.1.A1_atDN485487--4e+0At2g20463-C.G.S.X.
0.023e+034Triticum aestivumTaAffx.85502.1.S1_atCA622173--3e-1At1g73230nascent polypeptide-associated complex (NAC) domain-containing proteinC.G.S.X.
0.029e-134Vitis vinifera1609755_s_atCB347923hypothetical protein LOC100250040-2e+0At5g05080UBC22 (ubiquitin-conjugating enzyme 22)C.G.S.X.
0.021e+034Zea maysZmAffx.46.1.A1_atAI664945hypothetical protein LOC100273468-3e+0At5g62260DNA bindingC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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