Gene omics information

Query gene ID At5g07030
Gene name aspartic-type endopeptidase
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7788.0At5g07030830594aspartic-type endopeptidaseF:aspartic-type endopeptidase activity;P:proteolysis;C:cell wall, plant-type cell wall;PMFOS.X.H.G.
0.6378.1At5g51560835230leucine-rich repeat transmembrane protein kinase, putativeF:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAS.X.H.G.
0.5773.8At3g17840821053RLK902Encodes a receptor-like kinase found at the cell surface of various tissues. Its function remains unknown.S.X.H.G.
0.5570.6At4g03210828024XTH9 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 9)encodes a member of xyloglucan endotransglucosylase/hydrolases (XTHs) that catalyze the cleavage and molecular grafting of xyloglucan chains function in loosening and rearrangement of the cell wall. Gene is expressed in shoot apex region, flower buds, flower stalks and internodes bearing flowers.S.X.H.G.
0.5368.6At3g56370824804leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.5368.6At2g05790815130glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFOS.X.H.G.
0.5267.4At3g15680820811zinc finger (Ran-binding) family proteinF:binding, zinc ion binding;P:biological_process unknown;C:intracellular;MPOFBS.X.H.G.
0.4761.2At4g34160829564CYCD3encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1.S.X.H.G.
0.4659.8At5g11550831027bindingF:binding;P:biological_process unknown;C:chloroplast;PMFOBVS.X.H.G.
0.4152.4At5g61130836234PDCB1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1)Encodes a plasmodesmatal localized protein with callose binding activity. The function of PDCB1 is unknown but overexpression leads to the hyperaccumulation of callose.S.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
19.099.5GSM133920Weigel_2-12_CHIP-206-C_Rep3_ATH1GSE5746FRI FLC combos
17.999.5GSM62701arf6/arf6 ARF8/arf8_stemGSE2848Auxin Response Factor mediated flower gene expression
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.158e-1685At3g54400824606aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:apoplast, cell wall, chloroplast, plant-type cell wall;PMFOC.G.S.X.
0.024e-240At1g77010844037pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:unknown;POMFC.G.S.X.
0.012e-138At3g09650820122HCF152 (HIGH CHLOROPHYLL FLUORESCENCE 152)RNA binding protein involved in the processing of chloroplast psbB-psbT-psbH-petB-petD transcript unit.C.G.S.X.
0.017e-136At5g58410835954binding / protein binding / zinc ion bindingF:protein binding, binding, zinc ion binding;P:unknown;C:unknown;MFOPBC.G.S.X.
0.017e-136At1g78000844135SULTR1Encodes a sulfate transporter that can restore sulfate uptake capacity of a yeast mutant lacking sulfate transporter genes.C.G.S.X.
0.013e+034At5g52430835319hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBVAC.G.S.X.
0.023e+034At5g61650836287CYCP4The P-type cyclins (CYCPs) share a conserved central region of 100 amino acids ('cyclin box') displaying homology to the corresponding region of the PHO80 cyclin from Saccharomyces cerevisiae and the related G1 cyclins from Trypanosoma cruzi and T. brucei.C.G.S.X.
0.013e+034At5g47250834772disease resistance protein (CC-NBS-LRR class), putativeF:protein binding, ATP binding;P:defense response, apoptosis;C:mitochondrion;PMBOFAC.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-138Glycine maxGma.308.1.S1_atCD414058--6e-5At3g54400aspartyl protease family proteinC.G.S.X.
0.064e-756Hordeum vulgareContig13984_atContig13984--6e-7At5g07030aspartic-type endopeptidaseC.G.S.X.
0.092e-861Oryza sativaOs07g0658600CK738634-Radc11e-8At5g07030aspartic-type endopeptidaseC.G.S.X.
0.029e-136Populus trichocarpaPtpAffx.212576.1.S1_atpmrna24636hypothetical protein-3e-1At4g36010pathogenesis-related thaumatin family proteinC.G.S.X.
0.087e-446Triticum aestivumTa.1953.3.S1_a_atCK211170--3e-4At5g07030aspartic-type endopeptidaseC.G.S.X.
0.169e-754Vitis vinifera1606471_atCF372161hypothetical protein LOC100244589-3e-6At5g07030aspartic-type endopeptidaseC.G.S.X.
0.032e-859Zea maysZm.1133.1.S1_atBM382336hypothetical protein LOC100191400-6e-8At5g07030aspartic-type endopeptidaseC.G.S.X.
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Biological processes

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ECCGO IDProcess Name
CGO:0006508The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with the hydrolysis of peptide bonds.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

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