Gene omics information

Query gene ID At5g06960
Gene name OBF5 (OCS-ELEMENT BINDING FACTOR 5)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g06960830587OBF5 (OCS-ELEMENT BINDING FACTOR 5)Encodes a basic leucine zipper (B-ZIP) containing protein that interacts with NPR1 to promote expression of salicylic acid induced genes. Binds the ocs-element.S.X.H.G.
0.4558.3At1g32790840173RNA-binding protein, putativeRNA-binding protein, putative, similar to RNA-binding protein GB:CAB40027 GI:4539439 from (Arabidopsis thaliana).Member of a family of PAB2 binding domain proteins.S.X.H.G.
0.4253.9At1g04440839520CKL13 (CASEIN KINASE LIKE 13)F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MOPBFVAS.X.H.G.
0.3846.7At5g59420836061ORP3C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3C)F:oxysterol binding;P:steroid metabolic process;C:cellular_component unknown;MFOPS.X.H.G.
0.3643.6At4g21450826300vesicle-associated membrane family protein / VAMP family proteinF:structural molecule activity;P:biological_process unknown;C:plasma membrane;MOFPBVS.X.H.G.
0.3439.8At1g25280839112AtTLP10 (TUBBY LIKE PROTEIN 10)Member of TLP familyS.X.H.G.
0.3439.8At4g39910830150ATUBP3 (ARABIDOPSIS THALIANA UBIQUITIN-SPECIFIC PROTEASE 3)Encodes a nuclear ubiquitin-specific protease.S.X.H.G.
0.3338.1At5g50230835088nucleotide bindingF:nucleotide binding;P:multicellular organismal development;C:heterotrimeric G-protein complex;MFOBPAVS.X.H.G.
0.3338.1At5g61500836271ATG3F:molecular_function unknown;P:autophagy;C:cellular_component unknown;MFOPS.X.H.G.
0.3133.8At1g75850843918VPS35B (VPS35 HOMOLOG B)F:unknown;P:intracellular protein transport, retrograde transport, endosome to Golgi;C:cellular_component unknown;MFOPBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
59.299.8GSM133773Lindsey_1-25_torpedo-meristem_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
35.199.7GSM133966Fukuda_1-11_10A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
26.599.7GSM133964Fukuda_1-9_8A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
26.299.7GSM133763Lindsey_1-15_torpedo-cotyledon_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
23.599.6GSM133967Fukuda_1-12_10B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
21.399.6GSM133965Fukuda_1-10_8B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
20.799.6GSM133960Fukuda_1-5_4A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
20.299.6GSM133959Fukuda_1-4_2B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
20.099.6GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibition
18.799.5GSM133963Fukuda_1-8_6B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.750646At5g06950830586AHBP-1BTranscription factor of the B-ZIP family that has high affinity for C-box motifs. Interacts with NPR1 and may regulate PR gene expression. Phosphorylated by a CK2-like protein in vitro. Phosphorylation is enhanced by salicylic acid treatment.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.192e-1377Glycine maxGma.3727.1.S1_atCD406941transcription factor bZIP98-2e-16At3g12250TGA6 (TGACG MOTIF-BINDING FACTOR 6)C.G.S.X.
0.231e-963Hordeum vulgareContig5907_atContig5907--3e-9At5g06960OBF5 (OCS-ELEMENT BINDING FACTOR 5)C.G.S.X.
0.136e-550Oryza sativaOs01g0808100AB051297.1-Transcription factor HBP-1b(c1) (Fragment)6e-5At5g06950AHBP-1BC.G.S.X.
0.527e-35149Populus trichocarpaPtp.1505.1.S1_a_atCK092007hypothetical protein-3e-40At3g12250TGA6 (TGACG MOTIF-BINDING FACTOR 6)C.G.S.X.
0.101e-757Triticum aestivumTa.23670.1.S1_atCA705573transcription factor HBP-1b(c1)-5e-8At1g68640PAN (PERIANTHIA)C.G.S.X.
0.121e-1789Vitis vinifera1614633_atCB978076similar to TGA-type basic leucine zipper protein TGA2.1-1e-16At3g12250TGA6 (TGACG MOTIF-BINDING FACTOR 6)C.G.S.X.
0.079e-1063Zea maysZm.19119.1.A1_atCO521073hypothetical protein LOC100274089-1e-11At1g68640PAN (PERIANTHIA)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009410A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a xenobiotic compound stimulus. Xenobiotic compounds are compounds foreign to living organisms.
XGO:0009863A series of molecular signals mediated by salicylic acid.
SGO:0009814A response of a plant to a pathogenic agent that prevents the occurrence or spread of disease.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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