Gene omics information

Query gene ID At5g06800
Gene name myb family transcription factor
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At5g06800830570myb family transcription factorF:transcription factor activity;P:regulation of transcription;C:unknown;POFMS.X.H.G.
0.5570.6At5g19970832119unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.4050.8At3g25930822190universal stress protein (USP) family proteinF:molecular_function unknown;P:response to stress;C:cellular_component unknown;PS.X.H.G.
0.3133.8At4g37060829860PLP5 (PATATIN-LIKE PROTEIN 5)F:nutrient reservoir activity;P:metabolic process, lipid metabolic process;C:cellular_component unknown;PBOMFS.X.H.G.
0.3032.1At1g50560841477CYP705A25member of CYP705AS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
229.0100.0GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
204.5100.0GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
179.3100.0GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
86.599.9GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
73.299.9GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
43.799.8GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
37.599.7GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
36.499.7GSM179967Arabidopsis aux1 mutant roots, air treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
35.199.7GSM179958Arabidopsis roots, air treatment, replica 1GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
34.899.7GSM179959Arabidopsis roots, air treatment, replica 2GSE7432Ethylene and auxin interactions in the roots of Arabidopsis seedlings
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.069e-342At4g28610828979PHR1 (PHOSPHATE STARVATION RESPONSE 1)Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling.C.G.S.X.
0.024e-240At3g13040820490myb family transcription factorF:transcription factor activity;P:regulation of transcription;C:unknown;PMOFBAC.G.S.X.
0.021e-138At5g42640834272zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;PMC.G.S.X.
0.011e-138At5g09620830821octicosapeptide/Phox/Bem1p (PB1) domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBVC.G.S.X.
0.021e-138At3g04030819558myb family transcription factorF:transcription factor activity;P:regulation of transcription;C:unknown;POC.G.S.X.
0.021e-138At1g68670843197myb family transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.071e-1171Glycine maxGmaAffx.65279.1.A1_atBU547979--6e-12At5g06800myb family transcription factorC.G.S.X.
0.031e+034Hordeum vulgareHR01M21u_atHR01M21u--3e+0At2g35700ERF38 (ERF FAMILY PROTEIN 38)C.G.S.X.
0.033e-138Oryza sativaOs03g0329900AK063486.1-Phosphate starvation regulator protein (Regulatoryprotein of P- starvation acclimation response Psr1)2e-11At4g28610PHR1 (PHOSPHATE STARVATION RESPONSE 1)C.G.S.X.
0.041e-552Populus trichocarpaPtpAffx.1574.1.A1_atCV231285hypothetical protein-3e-8At2g20400myb family transcription factorC.G.S.X.
0.022e+034Triticum aestivumTaAffx.78657.1.S1_atCA729524--4e+0At1g76760ATY1 (ARABIDOPSIS THIOREDOXIN Y1)C.G.S.X.
0.033e+032Vitis vinifera1622571_atCB970577hypothetical protein LOC100255631-3e-11At2g21230bZIP family transcription factorC.G.S.X.
0.041e+034Zea maysZm.13714.1.S1_atCF245179hypothetical protein LOC100272524-1e-14At2g01060myb family transcription factorC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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