CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g06050

Gene name dehydration-responsive protein-related

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.67 81.6 At5g06050 830492 dehydration-responsive protein-related F:unknown;P:biological_process unknown;C:endomembrane system;PBOM S.X. H.G.
0.46 59.8 At3g08680 820015 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane, plant-type cell wall;PMOBFVA S.X. H.G.
0.30 32.1 At1g74690 843808 IQD31 (IQ-domain 31) F:calmodulin binding;P:biological_process unknown;C:cytosol, plasma membrane;MOFPBVA S.X. H.G.
0.25 22.6 At3g61650 825338 TUBG1 (GAMMA-TUBULIN) Required for centrosomal and noncentrosomal microtubule nucleation. Involved in specification of cell identity, such as stomatal patterning. Constitutively expressed throughout plant. S.X. H.G.
0.25 22.6 At5g27740 832836 EMB2775 (EMBRYO DEFECTIVE 2775) F:nucleoside-triphosphatase activity, DNA binding, nucleotide binding;P:DNA replication;C:unknown;OBMAFPV S.X. H.G.
0.21 15.8 At5g62690 836390 TUB2 encodes tubulin beta-2/beta-3 chain S.X. H.G.
0.17 10.2 At1g01510 839401 AN (ANGUSTIFOLIA) Encodes a homolog of human CtBP. Mutant has longer and thicker leaves than wild type. Involved in controlling polar cell expansion in the leaf width direction. S.X. H.G.
0.13 5.8 At3g66658 819849 ALDH22a1 (Aldehyde Dehydrogenase 22a1) Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures. S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
47.1 99.8 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
43.0 99.8 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
42.3 99.8 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
42.3 99.8 GSM253652 Ler 2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
40.6 99.8 GSM143306 High_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
40.4 99.8 GSM205435 Col_ leaf_ wildtype_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
40.2 99.8 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
39.2 99.8 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
38.4 99.8 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
38.2 99.8 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.42 5e-92 339 At2g39750 818560 dehydration-responsive family protein F:unknown;P:biological_process unknown;C:unknown;PMOBFVA C.G. S.X.
0.27 7e-42 173 At1g77260 844062 dehydration-responsive protein-related F:unknown;P:biological_process unknown;C:cellular_component unknown;PBOM C.G. S.X.
0.14 1e-30 135 At3g03370 821271 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.02 2e-5 52 At4g10440 826636 dehydration-responsive family protein F:unknown;P:unknown;C:unknown;PBOA C.G. S.X.
0.01 3e-4 48 At1g33170 840213 dehydration-responsive family protein F:unknown;P:biological_process unknown;C:unknown;PBOAM C.G. S.X.
0.01 4e-3 44 At2g34300 817991 dehydration-responsive protein-related F:unknown;P:biological_process unknown;C:Golgi apparatus;OMBFPVA C.G. S.X.
0.01 7e-2 40 At5g14430 831294 dehydration-responsive protein-related F:unknown;P:unknown;C:Golgi apparatus, plasma membrane, plant-type cell wall;PBO C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.29 1e-62 242 Glycine max GmaAffx.85050.1.S1_at AW311557 - - 1e-65 At2g39750 dehydration-responsive family protein C.G. S.X.
0.02 2e+0 34 Hordeum vulgare Contig8375_at Contig8375 - - 1e-37 At3g23300 dehydration-responsive protein-related C.G. S.X.
0.16 3e-36 155 Oryza sativa Os01g0846600 AK070193.1 - Putative methyltransferase DUF248 family protein 1e-28 At2g39750 dehydration-responsive family protein C.G. S.X.
0.39 4e-50 200 Populus trichocarpa PtpAffx.207723.1.S1_s_at pmrna15345 hypothetical protein - 8e-76 At2g39750 dehydration-responsive family protein C.G. S.X.
0.02 7e-5 50 Triticum aestivum Ta.13944.1.S1_at BQ744456 - - 2e+0 At2g39750 dehydration-responsive family protein C.G. S.X.
0.05 8e-5 48 Vitis vinifera 1615531_at CB347122 hypothetical protein LOC100248795 - 8e-20 At1g77260 dehydration-responsive protein-related C.G. S.X.
0.01 4e-1 36 Zea mays Zm.9675.1.A1_at BM335265 chitinase 2 - 5e+0 At1g62250 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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