CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g05860

Gene name UGT76C2

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At5g05860 830471 UGT76C2 F:in 6 functions;P:metabolic process;C:unknown;PMBVOF S.X. H.G.
0.41 52.4 At3g03380 821268 DegP7 (DegP protease 7) Encodes a putative DegP protease. S.X. H.G.
0.41 52.4 At1g72710 843603 CKL2 (CASEIN KINASE 1-LIKE PROTEIN 2) Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus. S.X. H.G.
0.37 45.0 At1g50200 841442 ALATS (ALANYL-TRNA SYNTHETASE) F:alanine-tRNA ligase activity, ligase activity, forming aminoacyl-tRNA and related compounds, nucleotide binding, nucleic acid binding, ATP binding;P:alanyl-tRNA aminoacylation, response to cadmium ion;C:mitochondrion, chloroplast;OBMAFP S.X. H.G.
0.35 41.6 At1g67580 843079 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cytosol;MOPFBVA S.X. H.G.
0.32 35.7 At3g47000 823853 glycosyl hydrolase family 3 protein F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:cellular_component unknown;BOFPAM S.X. H.G.
0.31 33.8 At5g19330 832053 armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein F:protein binding, binding;P:unknown;C:plasma membrane;MPOFVBA S.X. H.G.
0.27 26.2 At1g34320 840333 unknown protein F:unknown;P:N-terminal protein myristoylation;C:plasma membrane;PMB S.X. H.G.
0.26 24.4 At2g38020 818380 VCL1 (VACUOLELESS 1) necessary for proper vacuole formation and morphogenesis in Arabidopsis S.X. H.G.
0.25 22.6 At1g70570 843394 anthranilate phosphoribosyltransferase, putative F:anthranilate phosphoribosyltransferase activity, transferase activity, transferring glycosyl groups;P:tryptophan biosynthetic process, metabolic process;C:chloroplast;BOAP S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
146.8 99.9 GSM133957 Fukuda_1-2_0B_Rep2_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.
45.5 99.8 GSM226530 LCOLUMELLASB GSE8934 A high resolution organ expression map reveals novel expression patterns and predicts cellular function
43.3 99.8 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
41.0 99.8 E-ATMX-31-raw-cel-1516948018
39.8 99.8 GSM133958 Fukuda_1-3_2A_Rep1_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.
37.7 99.7 GSM133959 Fukuda_1-4_2B_Rep2_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.
28.9 99.7 E-ATMX-31-raw-cel-1516948001
27.7 99.7 GSM133967 Fukuda_1-12_10B_Rep2_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.
27.6 99.7 E-ATMX-31-raw-cel-1516947984
27.0 99.7 GSM133965 Fukuda_1-10_8B_Rep2_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.23 1e-51 204 At5g05890 830474 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF C.G. S.X.
0.24 7e-47 188 At5g05880 830473 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF C.G. S.X.
0.26 4e-42 173 At5g05900 830475 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF C.G. S.X.
0.24 4e-33 143 At5g05870 830472 UGT76C1 (UDP-glucosyl transferase 76C1) F:in 6 functions;P:metabolic process;C:cellular_component unknown;PMBVOF C.G. S.X.
0.05 3e-6 54 At3g55700 824736 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF C.G. S.X.
0.02 1e-5 52 At3g46700 823823 UDP-glycosyltransferase/ transferase, transferring glycosyl groups F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:unknown;PMBVOF C.G. S.X.
0.09 5e-5 50 At3g11340 820307 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity;P:metabolic process;C:endomembrane system;PMBVOF C.G. S.X.
0.02 3e-3 44 At4g15500 827222 UGT84A4 Encodes a protein that might have sinapic acid:UDP-glucose glucosyltransferase activity. C.G. S.X.
0.01 4e-2 40 At5g59580 836077 UGT76E1 (UDP-GLUCOSYL TRANSFERASE 76E1) F:quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity;P:metabolic process;C:unknown;PMBVOF C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 3e-10 67 Glycine max GmaAffx.71939.1.S1_at BG156219 - - 3e-20 At5g38010 UDP-glucoronosyl/UDP-glucosyl transferase family protein C.G. S.X.
0.02 5e+0 32 Hordeum vulgare Contig20680_at Contig20680 - - 5e+0 At3g44716 unknown protein C.G. S.X.
0.04 4e-7 57 Oryza sativa Os07g0241500 AK107239.1 - - 2e-7 At5g05860 UGT76C2 C.G. S.X.
0.08 4e-3 44 Populus trichocarpa PtpAffx.204936.1.S1_at pmrna9772 hypothetical protein - 7e-7 At3g46690 UDP-glucoronosyl/UDP-glucosyl transferase family protein C.G. S.X.
0.02 1e+1 32 Triticum aestivum TaAffx.97073.1.S1_at AJ615999 - - 1e+0 At5g05110 cysteine protease inhibitor, putative / cystatin, putative C.G. S.X.
0.02 8e-1 34 Vitis vinifera 1612646_at CB349810 - - 6e-2 At3g61940 MTPA1 C.G. S.X.
0.02 1e+0 34 Zea mays ZmAffx.1420.1.S1_at 40794996-95 - - 5e-2 At2g07706 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0008152 The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
00908 Zeatin biosynthesis
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