Gene omics information

Query gene ID At5g05600
Gene name oxidoreductase, 2OG-Fe(II) oxygenase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6781.6At5g05600830443oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, iron ion binding;P:response to salt stress;C:unknown;POBFMS.X.H.G.
0.7385.5At1g44350841026ILL6encodes a protein similar to IAA amino acid conjugate hydrolase.S.X.H.G.
0.5773.8At1g51760841602IAR3 (IAA-ALANINE RESISTANT 3)encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers.S.X.H.G.
0.5570.6At3g51450824308strictosidine synthase family proteinF:strictosidine synthase activity;P:alkaloid biosynthetic process, biosynthetic process;C:endomembrane system;BPMOAFS.X.H.G.
0.4761.2At2g06050815160OPR3 (OPDA-REDUCTASE 3)Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence.S.X.H.G.
0.2726.2At5g42650834273AOS (ALLENE OXIDE SYNTHASE)Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
71.099.9GSM128676Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
69.299.9GSM128677Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
56.299.8GSM204069protoplast_hypoxia_rep1GSE8248Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells
55.499.8GSM184911Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
54.599.8GSM142836MG001_ATH1_A15-Torres-4N6GSE6176Impact of Type III effectors on plant defense responses
50.499.8GSM128675Underwood_1-28_DC3000-10e8-7h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
48.299.8GSM142838MG001_ATH1_A17-Torres-6N3GSE6176Impact of Type III effectors on plant defense responses
47.999.8GSM205160protoplast_controlDNA_rep2GSE8257Identification of KIN10-target genes in Arabidopsis mesophyll cells
47.899.8GSM142837MG001_ATH1_A16-Torres-6N1GSE6176Impact of Type III effectors on plant defense responses
47.299.8GSM142834MG001_ATH1_A12-Torres-5N6GSE6176Impact of Type III effectors on plant defense responses
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.683e-129462At3g11180820289oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, iron ion binding;P:unknown;C:cellular_component unknown;POBFMC.G.S.X.
0.252e-31137At3g55970824763oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, iron ion binding;P:unknown;C:cellular_component unknown;POBFMC.G.S.X.
0.024e-550At3g51240824287F3H (FLAVANONE 3-HYDROXYLASE)Encodes flavanone 3-hydroxylase that is coordinately expressed with chalcone synthase and chalcone isomerases. Regulates flavonoid biosynthesis.C.G.S.X.
0.022e-344At5g16110831468unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PC.G.S.X.
0.032e-344At3g614008253122-oxoglutarate-dependent dioxygenase, putative1-aminocyclopropane-1-carboxylate oxidase-like proteinC.G.S.X.
0.024e-240At3g12900820473oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;POBFMC.G.S.X.
0.024e-240At1g05010839345EFE (ETHYLENE-FORMING ENZYME)Encodes 1-aminocyclopropane-1-carboxylate oxidaseC.G.S.X.
0.011e-138At5g14990831351-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPAVC.G.S.X.
0.021e-138At5g59350836054unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.165e-240Glycine maxGmaAffx.47854.1.S1_atBM954625--2e-2At5g05600oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.031e+034Hordeum vulgareHVSMEl0005O09r2_atHVSMEl0005O09r2--3e+0At4g32020unknown proteinC.G.S.X.
0.048e-859Oryza sativaOs02g0630300AK059045.1-2OG-Fe(II) oxygenase domain containing protein4e-3At1g066502-oxoglutarate-dependent dioxygenase, putativeC.G.S.X.
0.108e-756Populus trichocarpaPtpAffx.106480.1.A1_atBP933199--5e-6At3g55970oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.056e-756Triticum aestivumTa.1553.1.S1_atCD452414--1e+0At3g11180oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.042e-446Vitis vinifera1621907_atAY257979.1flavonol synthase-3e-1At5g08640FLS (FLAVONOL SYNTHASE)C.G.S.X.
0.022e-136Zea maysZm.8714.1.A1_atAY359573.1acc oxidase-7e-10At1g05010EFE (ETHYLENE-FORMING ENZYME)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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