Gene omics information

Query gene ID At5g05500
Gene name pollen Ole e 1 allergen and extensin family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8994.6At5g05500830433pollen Ole e 1 allergen and extensin family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.8994.6At4g25820828687XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)Encodes a xyloglucan endotransglycosylase with a clear preference for non-fucosylated xyloglucan polymer.S.X.H.G.
0.8994.6At4g26010828707peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOS.X.H.G.
0.8994.6At5g67400836876peroxidase 73 (PER73) (P73) (PRXR11)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOS.X.H.G.
0.7586.9At4g40090830172AGP3 (arabinogalactan-protein 3)F:unknown;P:multicellular organismal development;C:endomembrane system;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
177.6100.0GSM142750MJ001_ATH1_A1-jones-WT1GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
167.8100.0GSM142751MJ001_ATH1_A2-jones-WT2GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
112.499.9GSM142754MJ001_ATH1_A5-jones-WT-Rep3GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
68.099.9GSM184844Arabidopsis, root, longitudinal zone 3, standard conditions, NaCl, replicate 2GSE7639Expression analysis of root developmental zones after treatment with salt
65.199.8GSM184838Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 8GSE7639Expression analysis of root developmental zones after treatment with salt
63.799.8GSM265431Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 2GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
60.599.8GSM184837Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 7GSE7639Expression analysis of root developmental zones after treatment with salt
53.099.8E-MEXP-722-raw-cel-1062243470
52.699.8E-MEXP-722-raw-cel-1062243559
48.399.8GSM265430Arabidopsis, root, longitudinal zone 3, -Fe conditions, rep 1GSE10497Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.037e-238At5g18810831999SCL28encodes an SC35-like splicing factor of 28 kD localized to the nuclear specks.C.G.S.X.
0.017e-238At3g06480819825DEAD box RNA helicase, putativeF:protein binding, helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity;P:biological_process unknown;C:vacuole;MBOFPVAC.G.S.X.
0.011e+034At4g03190828045GRH1 (GRR1-LIKE PROTEIN 1)Encodes an F box protein belonging to the TIR1 subfamily. This protein forms SCF complexes with ASK1 and CUL1 and interacts with Aux/IAA proteins in an auxin-dependent manner. It also has sequence similarity to the yeast protein GRR1, which is involved in glucose repression.C.G.S.X.
0.021e+034At3g07810819972heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putativeF:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:unknown;MBOPFVAC.G.S.X.
0.011e+034At2g31820817739ankyrin repeat family proteinF:protein binding;P:unknown;C:plasma membrane;MOFBPVAC.G.S.X.
0.021e+034At1g09830837515phosphoribosylamine--glycine ligase (PUR2)glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamideC.G.S.X.
0.014e+032At5g55670835661RNA recognition motif (RRM)-containing proteinF:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MBOFPVAC.G.S.X.
0.014e+032At5g11240830994transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:biological_process unknown;C:endomembrane system;BMFOPAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e+034Glycine maxGma.4352.1.S1_atCA799609--3e-3At1g67540unknown proteinC.G.S.X.
0.038e+030Hordeum vulgareHVSMEl0007E24r2_atHVSMEl0007E24r2--4e+0At5g05500pollen Ole e 1 allergen and extensin family proteinC.G.S.X.
0.048e+032Oryza sativaOsAffx.3577.1.S1_at---0C.G.S.X.
0.044e-136Populus trichocarpaPtpAffx.7190.2.A1_atCV228585hypothetical protein-5e-15At3g19910zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.041e+034Triticum aestivumTaAffx.107773.1.S1_atCA695634--3e+0At1g47495unknown proteinC.G.S.X.
0.035e+030Vitis vinifera1618992_atCB343533--3e-1At2g31940unknown proteinC.G.S.X.
0.043e-238Zea maysZmAffx.1358.1.S1_at40794996-159--0Atmg01170-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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