Gene omics information

Query gene ID At5g05300
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7788.0At5g05300830412unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.8894.0At5g24110832476WRKY30member of WRKY Transcription Factor; Group IIIS.X.H.G.
0.8793.5At3g23220821900DNA binding / transcription factorencodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.S.X.H.G.
0.8793.5At1g14540838016anionic peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMS.X.H.G.
0.8793.5At2g37430818319zinc finger (C2H2 type) family protein (ZAT11)F:transcription factor activity, zinc ion binding, nucleic acid binding;P:response to chitin, regulation of transcription;C:intracellular;MPOFS.X.H.G.
0.8693.1At4g26200828726ACS7Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA.S.X.H.G.
0.8592.4At1g30370839917lipase class 3 family proteinF:triacylglycerol lipase activity;P:lipid metabolic process;C:unknown;PBOFMVS.X.H.G.
0.8592.4At1g22810838887AP2 domain-containing transcription factor, putativeencodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.S.X.H.G.
0.8491.9At5g66620836794DAR6 (DA1-RELATED PROTEIN 6)F:zinc ion binding;P:unknown;C:unknown;MOBFPVAS.X.H.G.
0.8391.4At1g08860837408BON3 (BONZAI 3)Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Overexpression of this gene suppresses bon1-1 phenotypes. Double mutant analyses with bon1-1 suggest that BON1 and BON3 have overlapping functions in maintaining cellular homeostasis and inhibiting cell death.S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
919.1100.0E-MEXP-807-raw-cel-1173273144
781.8100.0E-MEXP-807-raw-cel-1173273252
335.3100.0E-MEXP-807-raw-cel-1173273116
290.5100.0E-MEXP-807-raw-cel-1173273060
278.7100.0E-MEXP-807-raw-cel-1173273170
197.6100.0E-MEXP-807-raw-cel-1173273223
150.299.9E-MEXP-807-raw-cel-1173273088
114.699.9GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
109.299.9GSM39197RRE1_Chitin3GSE2169rre1 and rre2 mutants
102.299.9E-MEXP-807-raw-cel-1173273196
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.344e-1477At3g10930820264unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PC.G.S.X.
0.044e-238At4g30230829146unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.021e-136At3g16600820911SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing proteinF:in 6 functions;P:unknown;C:unknown;MFBOPVAC.G.S.X.
0.046e-134At3g63120825487CYCP1F:cyclin-dependent protein kinase activity;P:regulation of cell cycle;C:cellular_component unknown;FMOPBC.G.S.X.
0.016e-134At3g23660821946transport protein, putativeF:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFOPC.G.S.X.
0.036e-134At2g28660817415copper-binding family proteinF:copper ion binding, metal ion binding;P:copper ion transport, metal ion transport;C:chloroplast;OPMBFC.G.S.X.
0.012e+032At5g20690832192ATP binding / kinase/ protein serine/threonine kinaseF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAC.G.S.X.
0.012e+032At5g22010832261AtRFC1 (replication factor C 1)F:DNA clamp loader activity, nucleoside-triphosphatase activity, DNA binding, nucleotide binding, ATP binding;P:DNA replication;C:DNA replication factor C complex, intracellular;BOMFAPVC.G.S.X.
0.022e+032At4g18900827624transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:biological_process unknown;C:cellular_component unknown;MFOBPAVC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-136Glycine maxGma.10891.2.S1_atAW424162--1e-12At2g25670unknown proteinC.G.S.X.
0.034e+030Hordeum vulgareContig708_atContig708--1e-15At2g4020560S ribosomal protein L41 (RPL41C)C.G.S.X.
0.041e+034Oryza sativaOs09g0397200CR285833-Conserved hypothetical protein7e-2At1g35333unknown proteinC.G.S.X.
0.063e+032Populus trichocarpaPtp.564.1.A1_atCK088790hypothetical protein-5e-4At3g59500integral membrane HRF1 family proteinC.G.S.X.
0.046e-134Triticum aestivumTaAffx.6645.1.S1_atCA680940--1e+0At5g55570unknown proteinC.G.S.X.
0.043e+030Vitis vinifera1617591_atCF606229--1e+1At5g42504unknown proteinC.G.S.X.
0.071e+032Zea maysZmAffx.21.1.A1_atAI600464--3e+0At5g05300unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage