Gene omics information

Query gene ID At5g05260
Gene name CYP79A2 (CYTOCHROME P450 79A2)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.9195.6At5g05260830408CYP79A2 (CYTOCHROME P450 79A2)Encodes cytochrome P450 CYP79A2.S.X.H.G.
1.00100.0At3g09140820068unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
1.00100.0At4g37950829951lyaseF:lyase activity;P:biological_process unknown;C:unknown;PFBS.X.H.G.
0.9195.6At2g26320817172AGL33 (AGAMOUS-LIKE 33)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMFOS.X.H.G.
0.7586.9At4g27890828902nuclear movement family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBS.X.H.G.
0.7385.5At4g17160827427ATRABB1A (ARABIDOPSIS RAB GTPASE HOMOLOG B1A)F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:unknown;MOFPBVAS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1091.0100.0GSM284394Arabidopsis GCE3GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
1030.3100.0GSM284392Arabidopsis GCE1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
968.8100.0GSM311279Laser capture microdissected (LCM) chalazal endosperm at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
893.4100.0GSM311280Laser capture microdissected (LCM) chalazal endosperm at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
768.1100.0GSM284393Arabidopsis GCE2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
139.899.9GSM311292Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
105.799.9GSM311291Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
25.999.7GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
22.699.6GSM67087Arabidopsis_Stigma03GSE3056Arabidopsis Pollination Study
20.399.6GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.8501427At5g35917833580CYP79A3Pa pseudogene with cytochrome P450 domainC.G.S.X.
0.383e-111402At5g35920833581CYP79A4Pa cytochrome P450 pseudogeneC.G.S.X.
0.015e-240At1g79310844269AtMC7 (metacaspase 7)F:cysteine-type endopeptidase activity;P:proteolysis;C:cellular_component unknown;BFOPAC.G.S.X.
0.025e-240At1g79370844275CYP79C1member of CYP79CC.G.S.X.
0.025e-240At1g59730842266ATH7 (thioredoxin H-type 7)F:unknown;P:N-terminal protein myristoylation, cell redox homeostasis;C:cellular_component unknown;BOMPFAVC.G.S.X.
0.012e-138At5g58670835981PLC1 (PHOSPHOLIPASE C 1)phosphatidylinositol-specific phospholipase C is induced to a significant extent under various environmental stresses, such as dehydration, salinity, and low temperature. May play a role in secondary ABA response. There are two genes called ATPLC1, one corresponding to AT4g38530 and one corresponding ot AT5g58670 (this one).C.G.S.X.
0.022e-138At2g36610818233ATHB22 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 22)Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.C.G.S.X.
0.018e-136At5g04690830347-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPBFAVC.G.S.X.
0.028e-136At5g25240832595-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.027e-240Glycine maxGmaAffx.6553.1.S1_atCD399622--1e+0At4g25410DNA binding / transcription factorC.G.S.X.
0.012e+034Hordeum vulgareContig11055_atContig11055--1e+0At2g37530unknown proteinC.G.S.X.
0.022e+036Oryza sativaOs03g07173009631.m04967-Conserved hypothetical protein3e-1At1g78510SPS1 (solanesyl diphosphate synthase 1)C.G.S.X.
0.021e+036Populus trichocarpaPtpAffx.203842.1.S1_atpmrna7585cytochrome P450-2e-4At2g22330CYP79B3C.G.S.X.
0.025e-240Triticum aestivumTa.3619.3.S1_x_atCA723651--1e-2At5g05260CYP79A2 (CYTOCHROME P450 79A2)C.G.S.X.
0.026e-238Vitis vinifera1620938_atCA817950hypothetical LOC100248291-1e+0At1g78220GRF13C.G.S.X.
0.025e+032Zea maysZm.15533.1.S1_atCN845512cytokinin-O-glucosyltransferase 2-2e-1At4g15940fumarylacetoacetate hydrolase family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0019761The chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00347Link to KaPPA-View 4Cytochrome P450



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
00966Link to KEGG PATHWAYGlucosinolate biosynthesis
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage