Gene omics information

Query gene ID At5g04730
Gene name unknown protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g04730830351unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.9296.0At1g33840840280unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFS.X.H.G.
0.8793.5At4g08620826426SULTR1High affinity sulfate transporter. Contains STAS domain, essential for sulfur uptake function. Expressed in roots and guard cells. Up-regulated by sulfur deficiency. Down-regulated by cytokinin. Localized to the plasma membrane.S.X.H.G.
0.8592.4At5g37450833722leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.8089.8At1g70880843425Bet v I allergen family proteinF:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;PS.X.H.G.
0.7989.1At5g52350835311ATEXO70A3 (exocyst subunit EXO70 family protein A3)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.S.X.H.G.
0.7888.6At1g49860841409ATGSTF14Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).S.X.H.G.
0.6781.6At2g28270817373DC1 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.6478.9At1g11540837697unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBAPS.X.H.G.
0.6478.9At1g26250839166proline-rich extensin, putativeF:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPBOFVAS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
231.9100.0GSM142751MJ001_ATH1_A2-jones-WT2GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
201.1100.0GSM142754MJ001_ATH1_A5-jones-WT-Rep3GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
199.0100.0GSM142750MJ001_ATH1_A1-jones-WT1GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.032e-138At5g35810833567-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.012e-138At4g08920826470CRY1 (CRYPTOCHROME 1)Encodes CRY1, a flavin-type blue-light photoreceptor with ATP binding and autophosphorylation activity. The photoreceptor may be involved in electron transport. Mutant phenotype displays a blue light-dependent inhibition of hypocotyl elongation. Photoreceptor activity requires light-induced homodimerisation of the N-terminal CNT1 domains of CRY1. Involved in blue-light induced stomatal opening. The C-terminal domain of the protein undergoes a light dependent conformational change. Also involved in response to circadian rhythm. Mutants exhibit long hypocotyl under blue light and are out of phase in their response to circadian rhythm. CRY1 is present in the nucleus and cytoplasm. Different subcellular pools of CRY1 have different functions during photomorphogenesis of Arabidopsis seedlings.C.G.S.X.
0.019e-136At5g60980836219nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing proteinF:RNA binding, nucleotide binding, nucleic acid binding;P:transport, nucleocytoplasmic transport;C:intracellular;BMPOFVAC.G.S.X.
0.019e-136At5g41315834133GL3 (GLABROUS 3)encodes a basic helix loop helix domain protein that interacts with GL1 in trichome development.C.G.S.X.
0.019e-136At3g22690821840pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:regulation of chlorophyll biosynthetic process, photosystem II assembly, photosystem I assembly, thylakoid membrane organization, RNA modification;C:chloroplast;POMFBAC.G.S.X.
0.019e-136At3g18670821398ankyrin repeat family proteinF:protein binding;P:unknown;C:unknown;MOPBFAVC.G.S.X.
0.019e-136At2g19220816439unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFC.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e-346Glycine maxGma.14802.1.S1_atAW201116--1e-5At5g04700-C.G.S.X.
0.022e+034Hordeum vulgareEBro08_SQ002_H13_atEBro08_SQ002_H13--6e-1At3g43432unknown proteinC.G.S.X.
0.011e-140Oryza sativaOsAffx.15487.1.S1_at---0C.G.S.X.
0.028e-240Populus trichocarpaPtpAffx.205440.1.S1_x_atpmrna10753hypothetical protein-2e-22At5g21990tetratricopeptide repeat (TPR)-containing proteinC.G.S.X.
0.029e-136Triticum aestivumTaAffx.83156.1.S1_atCA660974--9e-1At2g37630AS1 (ASYMMETRIC LEAVES 1)C.G.S.X.
0.027e-238Vitis vinifera1619862_atCB979196hypothetical protein LOC100251016-3e-1At4g32470ubiquinol-cytochrome C reductase complex 14 kDa protein, putativeC.G.S.X.
0.012e+034Zea maysZm.17646.1.S1_atCK368863BGGP Beta-1-3-galactosyl-O-glycosyl-glycoprotein-5e-3At2g37585glycosyltransferase family 14 protein / core-2/I-branching enzyme family proteinC.G.S.X.
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Biological processes

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ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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