Gene omics information

Query gene ID At5g04120
Gene name phosphoglycerate/bisphosphoglycerate mutase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g04120830290phosphoglycerate/bisphosphoglycerate mutase family proteinF:catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAS.X.H.G.
0.4152.4At4g11190826721disease resistance-responsive family protein / dirigent family proteinF:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;PS.X.H.G.
0.4152.4At5g60660836187PIP2F:water channel activity;P:transport;C:integral to membrane, membrane;BPMOFAVS.X.H.G.
0.3745.0At1g65310842839XTH17 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17)putative xyloglucan endotransglycosylase/hydrolase, expressed in the mature or basal regions of both the main and lateral roots, but not in the tip of these roots where cell division occurs.S.X.H.G.
0.3541.6At3g48970824058copper-binding family proteinF:copper ion binding, metal ion binding;P:copper ion transport, metal ion transport;C:unknown;PBOS.X.H.G.
0.3541.6At5g15290831381integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.2726.2At2g34500818013CYP710A1 (cytochrome P450, family 710, subfamily A, polypeptide 1)Encodes a protein with C22-sterol desaturase activity. The enzyme was shown to catalyze in the presence of NADPH the conversion of β-sitosterol to stigmasterol, but not that of 24-epi-campesterol to brassicasterol (unlike CYP710A2).S.X.H.G.
0.2420.7At5g44440834471FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAMS.X.H.G.
0.2319.3At2g25160817054CYP82F1member of CYP82FS.X.H.G.
0.2014.4At4g22460828341protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
114.999.9E-MEXP-1304-raw-cel-1530618235
113.499.9E-MEXP-1304-raw-cel-1530618033
109.799.9E-MEXP-1468-raw-cel-1591138754
108.499.9E-MEXP-1304-raw-cel-1530618203
100.599.9E-MEXP-1468-raw-cel-1591138721
94.899.9E-MEXP-1304-raw-cel-1530618068
92.699.9E-MEXP-1304-raw-cel-1530618003
79.999.9E-MEXP-1468-raw-cel-1591138886
79.399.9GSM266671Arabidopsis, root cells, cortex, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
79.199.9E-MEXP-1468-raw-cel-1591138853
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.024e-446At4g12680826880unknown proteinF:unknown;P:unknown;C:endomembrane system;PC.G.S.X.
0.029e-238At1g68840843216RAV2 (REGULATOR OF THE ATPASE OF THE VACUOLAR MEMBRANE)Rav2 is part of a complex that has been named `regulator of the (H+)-ATPase of the vacuolar and endosomal membranes' (RAVE)C.G.S.X.
0.024e-136At3g59530825122strictosidine synthase family proteinF:strictosidine synthase activity;P:alkaloid biosynthetic process, pollen exine formation;C:endomembrane system;BPMOFAC.G.S.X.
0.014e-136At3g63370825512pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:unknown;C:unknown;POFMC.G.S.X.
0.024e-136At1g72800843611nuM1-relatedF:nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;PBFMOAVC.G.S.X.
0.011e+034At5g04810830360pentatricopeptide (PPR) repeat-containing proteinF:nucleotide binding, nucleic acid binding;P:unknown;C:chloroplast;PMOFBVAC.G.S.X.
0.031e+034At5g47200834766ATRAB1AF:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:plasma membrane;MOFPBVAC.G.S.X.
0.021e+034At4g33870829530peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Glycine maxPsAffx.C63000063_atPsAffx.C63000063--8e-1At5g04120phosphoglycerate/bisphosphoglycerate mutase family proteinC.G.S.X.
0.024e-238Hordeum vulgareContig192_atContig192--2e-30At1g73230nascent polypeptide-associated complex (NAC) domain-containing proteinC.G.S.X.
0.022e-138Oryza sativaOsAffx.31869.3.S1_at---0C.G.S.X.
0.042e+034Populus trichocarpaPtpAffx.95925.1.A1_atCV227444histone acetyltransferase /// histone acetyltransferase /// hypothetical protein-6e-1At5g04120phosphoglycerate/bisphosphoglycerate mutase family proteinC.G.S.X.
0.044e-136Triticum aestivumTaAffx.84460.1.S1_atCA636346--6e-1At3g23130SUP (SUPERMAN)C.G.S.X.
0.032e+032Vitis vinifera1607539_atCB981677hypothetical protein LOC100267814-1e+0At4g33740unknown proteinC.G.S.X.
0.032e+032Zea maysZm.4353.1.A1_atAI795746--4e+0At3g08000RNA-binding protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0008152The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00008Link to KaPPA-View 4Serine and glycine metabolism
00111Link to KaPPA-View 4Glycolysis/gluconeogenesis



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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