CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g03610

Gene name GDSL-motif lipase/hydrolase family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At5g03610 831778 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM S.X. H.G.
0.36 43.6 At5g40760 834076 G6PD6 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 6) Encodes a cytosolic glucose-6-phosphate dehydrogenase that is insensitive to reduction by DTT and whose mRNA is expressed ubiquitously. S.X. H.G.
0.27 26.2 At1g22410 838847 2-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putative F:3-deoxy-7-phosphoheptulonate synthase activity;P:aromatic amino acid family biosynthetic process;C:membrane;OBPF S.X. H.G.
0.26 24.4 At4g24400 828542 CIPK8 (CBL-INTERACTING PROTEIN KINASE 8) Encodes a CBL (calcineurin B-like calcium sensor proteins) -interacting serine/threonine protein kinase. S.X. H.G.
0.26 24.4 At2g22250 816758 aminotransferase class I and II family protein F:L-aspartate:2-oxoglutarate aminotransferase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, catalytic activity;P:embryonic development ending in seed dormancy;C:chloroplast;BOPAMF S.X. H.G.
0.24 20.7 At1g61140 842407 EDA16 (embryo sac development arrest 16) F:in 6 functions;P:embryo sac development;C:unknown;MBFOPVA S.X. H.G.
0.23 19.3 At3g04670 819625 WRKY39 member of WRKY Transcription Factor; Group II-d S.X. H.G.
0.21 15.8 At2g20010 816520 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO S.X. H.G.
0.21 15.8 At3g06350 819809 MEE32 (MATERNAL EFFECT EMBRYO ARREST 32) F:NADP or NADPH binding, 3-dehydroquinate dehydratase activity, shikimate 5-dehydrogenase activity, binding, catalytic activity;P:embryonic development ending in seed dormancy;C:chloroplast stroma, chloroplast;BOAFP S.X. H.G.
0.20 14.4 At1g48860 841308 3-phosphoshikimate 1-carboxyvinyltransferase, putative / 5-enolpyruvylshikimate-3-phosphate, putative / EPSP synthase, putative F:3-phosphoshikimate 1-carboxyvinyltransferase activity, catalytic activity, transferase activity, transferring alkyl or aryl (other than methyl) groups;P:glyphosate metabolic process, aromatic amino acid family biosynthetic process;C:chloroplast;BOPAFM S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
61.7 99.8 GSM142839 MG001_ATH1_A18-Torres-6N6 GSE6176 Impact of Type III effectors on plant defense responses
59.3 99.8 GSM142837 MG001_ATH1_A16-Torres-6N1 GSE6176 Impact of Type III effectors on plant defense responses
53.6 99.8 GSM128719 Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1 GSE5525 Transcriptome changes of Arabidopsis during pathogen and insect attack
46.5 99.8 GSM142838 MG001_ATH1_A17-Torres-6N3 GSE6176 Impact of Type III effectors on plant defense responses
41.1 99.8 GSM133029 BC482-1 GSE5684 AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
32.4 99.7 E-MEXP-546-raw-cel-863289532
31.7 99.7 E-MEXP-546-raw-cel-863289424
31.3 99.7 GSM184922 Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 1 GSE7641 Expression analysis of root cell-types after treatment with salt
31.0 99.7 E-MEXP-711-raw-cel-1563002902
30.8 99.7 GSM142846 MG001_ATH1_A27-Torres-9N1 GSE6176 Impact of Type III effectors on plant defense responses
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.31 8e-28 125 At3g09930 820154 GDSL-motif lipase/hydrolase family protein F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM C.G. S.X.
0.16 2e-10 67 At5g03600 831781 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:unknown;PBOFM C.G. S.X.
0.10 1e-7 57 At5g03590 831783 GDSL-motif lipase/hydrolase protein-related F:hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:cellular_component unknown;PF C.G. S.X.
0.02 1e-1 38 At1g54030 841841 GDSL-motif lipase, putative F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:vacuole;PBOFM C.G. S.X.
0.02 5e-1 36 At4g02810 828170 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBVA C.G. S.X.
0.06 5e-1 36 At2g36325 5007939 hydrolase, acting on ester bonds F:hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:endomembrane system;PBOFM C.G. S.X.
0.02 5e-1 36 At2g27360 817279 lipase, putative F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:glycerol biosynthetic process, lipid metabolic process;C:endomembrane system;PBOFM C.G. S.X.
0.01 2e+0 34 At5g28235 832901 Ulp1 protease family protein F:cysteine-type peptidase activity;P:proteolysis;C:cellular_component unknown;OMBPFAV C.G. S.X.
0.01 2e+0 34 At5g45570 834593 Ulp1 protease family protein F:peptidase activity, cysteine-type peptidase activity;P:proteolysis;C:cellular_component unknown;POMBFA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 8e-1 36 Glycine max HgAffx.19448.1.S1_at CB299418 - - 2e-1 At5g03610 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.02 4e+0 32 Hordeum vulgare HVSMEg0016O05r2_at HVSMEg0016O05r2 - - 2e+0 At5g40950 RPL27 (RIBOSOMAL PROTEIN LARGE SUBUNIT 27) C.G. S.X.
0.02 1e+0 36 Oryza sativa Os02g0178000 AK111625.1 - SNF1 related protein kinase-like protein 6e-11 At1g01140 CIPK9 (CBL-INTERACTING PROTEIN KINASE 9) C.G. S.X.
0.05 3e-3 44 Populus trichocarpa PtpAffx.6494.1.A1_at CV256344 hypothetical protein - 2e-3 At5g03610 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.02 6e-1 36 Triticum aestivum TaAffx.113342.1.S1_at CA614911 - - 3e-1 At5g27090 AGL54 C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1617373_s_at CA816697 hypothetical protein LOC100245878 - 5e-6 At5g23570 SGS3 (SUPPRESSOR OF GENE SILENCING 3) C.G. S.X.
0.02 2e-1 36 Zea mays Zm.13860.1.A1_at AF439722.1 S-adenosyl-L-homocysteine hydrolase - 2e-76 At4g13940 MEE58 (MATERNAL EFFECT EMBRYO ARREST 58) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006629 The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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