Gene omics information

Query gene ID At5g03170
Gene name FLA11
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g03170831914FLA11F:unknown;P:unknown;C:anchored to membrane;PBOMAFS.X.H.G.
0.9897.8At2g41610818759unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9897.8At3g50220824184unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;POBS.X.H.G.
0.9897.8At5g17420831608IRX3 (IRREGULAR XYLEM 3)Encodes a xylem-specific cellulose synthase that is phosphorylated on one or more serine residues (on either S185 or one of S180 or S181).S.X.H.G.
0.9697.3At1g27380839627RIC2 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 2)encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Interacts with Rop1 and is involved in pollen tube growth and function. Protein most similar to RIC4 (family subgroup V). Gene is expressed in all tissues examined.S.X.H.G.
0.9697.3At2g29130817462LAC2 (laccase 2)putative laccase, knockout mutant had reduced root elongation under PEG-induced dehydrationS.X.H.G.
0.9697.3At5g15630831417IRX6Encodes a member of the COBRA family, similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars.S.X.H.G.
0.9697.3At5g44030834426CESA4 (CELLULOSE SYNTHASE A4)Encodes a cellulose synthase involved in secondary cell wall biosynthesis. Confers resistance towards bacterial and fungal pathogens, independent of salicylic acid, ethylene and jasmonate signaling.S.X.H.G.
0.9496.7At1g09610837488unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POBS.X.H.G.
0.9496.7At4g27435828852unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
229.7100.0GSM133753Turner_A-7-Turne-WT-Base1_SLDGSE5729Role of COV in vascular patterning
226.0100.0GSM133754Turner_A-8-Turne-WT-Base2_SLDGSE5729Role of COV in vascular patterning
180.8100.0GSM131656ATGE_27_BGSE5633AtGenExpress: Developmental series (shoots and stems)
171.5100.0GSM131655ATGE_27_AGSE5633AtGenExpress: Developmental series (shoots and stems)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.012e-240At3g19210821455ATRAD54 (ARABIDOPSIS HOMOLOG OF RAD54)Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases. Functions in DNA repair via homologous recombination.C.G.S.X.
0.022e-240At2g42340818835unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFOC.G.S.X.
0.019e-238At5g15450831398CLPB3 (CASEIN LYTIC PROTEINASE B3)Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype.C.G.S.X.
0.029e-238At5g05800830465unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFC.G.S.X.
0.099e-238At5g60490836170FLA12F:unknown;P:unknown;C:plasma membrane, anchored to membrane;PBOMAFC.G.S.X.
0.019e-238At3g50240824186KICP-02Encodes a kinesin-related protein.C.G.S.X.
0.029e-238At2g26540817195HEMDF:uroporphyrinogen-III synthase activity;P:tetrapyrrole biosynthetic process, porphyrin biosynthetic process;C:chloroplast;BOPAFC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e-136Glycine maxGmaAffx.26273.2.S1_atBM093168--1e-67At4g21710NRPB2C.G.S.X.
0.062e-446Hordeum vulgareContig7789_atContig7789--6e-4At5g03170FLA11C.G.S.X.
0.027e-136Oryza sativaOs01g0605700AK099440.1-MtN3 and saliva related transmembrane proteinfamily protein3e-5At5g62850AtVEX1 (VEGETATIVE CELL EXPRESSED1)C.G.S.X.
0.072e-344Populus trichocarpaPtp.792.1.S1_s_atAY607763.1hypothetical protein-2e-3At5g03170FLA11C.G.S.X.
0.062e+034Triticum aestivumTaAffx.78902.1.S1_atCA724983--9e-1At5g03170FLA11C.G.S.X.
0.064e-134Vitis vinifera1617808_atCF568855--1e+0At5g03170FLA11C.G.S.X.
0.036e-134Zea maysZmAffx.496.1.A1_atAI691675--8e-1At5g48580FKBP15-2C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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