CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g02290

Gene name NAK

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.12 4.9 At5g02290 831880 NAK Encodes a candidate protein kinase NAK that is similar to the oncogenes met and abl. S.X. H.G.
0.57 73.8 At4g38550 830012 - F:unknown;P:unknown;C:chloroplast;MFPOBVA S.X. H.G.
0.40 50.8 At3g19010 821434 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:flavonol synthase activity, oxidoreductase activity, iron ion binding;P:flavonoid biosynthetic process;C:cellular_component unknown;POBFM S.X. H.G.
0.31 33.8 At3g50950 824259 disease resistance protein (CC-NBS-LRR class), putative F:ATP binding;P:defense response, apoptosis;C:cellular_component unknown;PMBFOVA S.X. H.G.
0.20 14.4 At1g08930 837414 ERD6 (EARLY RESPONSE TO DEHYDRATION 6) encodes a putative sucrose transporter whose gene expression is induced by dehydration and cold. S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
31.3 99.7 GSM13784 Cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition
27.0 99.7 GSM13783 Dexamethasone plus cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition
23.1 99.6 E-MEXP-807-raw-cel-1173273170
22.6 99.6 E-MEXP-807-raw-cel-1173273060
22.6 99.6 GSM13779 Dexamethasone plus cycloheximide GSE911 Identification of LEAFY targets during reproductive transition
21.3 99.6 GSM13780 Cycloheximide GSE911 Identification of LEAFY targets during reproductive transition
20.8 99.6 E-MEXP-807-raw-cel-1173273116
16.0 99.5 GSM264764 paraquat 20mM 1h GSE10464 Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
14.0 99.4 E-MEXP-807-raw-cel-1173273252
12.9 99.3 GSM134457 St.Clair_1-82_294_Mt-0_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1 GSE5758 Expression Level Polymorphism Project (ELP) - Mt-0
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.23 5e-23 109 At2g28930 817442 APK1B F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane;MPOBFVA C.G. S.X.
0.27 2e-22 107 At2g39660 818549 BIK1 (BOTRYTIS-INDUCED KINASE1) Encodes a plasma membrane-localized ser/thr protein kinase that is a crucial component of host response signaling required to activate the resistance responses to Botrytis and A. brassicicola infection. It is likely a negative regulator of salicylic acid accumulation and basal defense against virulent bacterial pathogens. C.G. S.X.
0.22 1e-11 71 At1g07570 837271 APK1A Protein kinase capable of phosphorylating tyrosine, serine, and threonine residues C.G. S.X.
0.06 2e-7 57 At2g02800 814810 APK2B (PROTEIN KINASE 2B) Encodes protein kinase APK2b. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.22 2e-10 67 Glycine max Gma.4062.1.S1_at BI969642 - - 2e-10 At5g02290 NAK C.G. S.X.
0.09 5e-6 52 Hordeum vulgare Contig6247_at Contig6247 - - 1e-42 At1g07570 APK1A C.G. S.X.
0.12 3e-4 48 Oryza sativa Os03g0821900 AK070847.1 - Protein kinase domain containing protein 3e-38 At1g07570 APK1A C.G. S.X.
0.23 9e-13 75 Populus trichocarpa PtpAffx.145419.1.S1_at DN499425 hypothetical protein - 5e-13 At5g02290 NAK C.G. S.X.
0.04 4e-2 40 Triticum aestivum Ta.30723.1.S1_at CA667557 - - 3e-4 At1g48210 serine/threonine protein kinase, putative C.G. S.X.
0.03 2e-4 46 Vitis vinifera 1610364_at BM437363 hypothetical protein LOC100256105 - 4e-10 At5g15080 protein kinase, putative C.G. S.X.
0.13 3e-19 95 Zea mays Zm.12080.1.A1_at BM348988 protein kinase APK1A - 1e-18 At2g28930 APK1B C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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