CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At5g02230

Gene name haloacid dehalogenase-like hydrolase family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.50 65.3 At5g02230 831784 haloacid dehalogenase-like hydrolase family protein F:hydrolase activity, catalytic activity;P:metabolic process;C:cellular_component unknown;OBPFA S.X. H.G.
0.33 38.1 At3g05320 819696 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMF S.X. H.G.
0.32 35.7 At1g44830 841047 AP2 domain-containing transcription factor TINY, putative encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. S.X. H.G.
0.25 22.6 At1g50460 841468 HKL1 (HEXOKINASE-LIKE 1) F:hexokinase activity, fructokinase activity, glucokinase activity, ATP binding;P:response to salt stress, response to cold, response to osmotic stress;C:mitochondrion, plastid;MFPOB S.X. H.G.
0.17 10.2 At5g56980 835800 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PM S.X. H.G.
0.07 1.9 At1g20310 838619 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
249.1 100.0 E-MEXP-807-raw-cel-1173273196
144.3 99.9 E-MEXP-807-raw-cel-1173273170
136.0 99.9 E-MEXP-807-raw-cel-1173273223
127.5 99.9 E-MEXP-807-raw-cel-1173273088
125.6 99.9 E-MEXP-807-raw-cel-1173273060
110.3 99.9 E-MEXP-807-raw-cel-1173273116
101.3 99.9 GSM131321 AtGen_6-3421_Saltstress-Roots-6.0h_Rep1 GSE5623 AtGenExpress: Stress Treatments (Salt stress)
66.9 99.8 GSM131322 AtGen_6-3422_Saltstress-Roots-6.0h_Rep2 GSE5623 AtGenExpress: Stress Treatments (Salt stress)
53.6 99.8 GSM131325 AtGen_6-3521_Saltstress-Roots-12.0h_Rep1 GSE5623 AtGenExpress: Stress Treatments (Salt stress)
48.0 99.8 E-MEXP-807-raw-cel-1173273005
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.07 3e-8 59 At5g59490 836068 haloacid dehalogenase-like hydrolase family protein F:hydrolase activity, catalytic activity;P:metabolic process;C:cellular_component unknown;OBPFA C.G. S.X.
0.06 1e-1 38 At3g62040 825377 catalytic/ hydrolase F:hydrolase activity, catalytic activity;P:metabolic process;C:unknown;OBPFA C.G. S.X.
0.01 4e-1 36 At3g47700 823924 MAG2 (maigo2) Involved in transportation of seed storage proteins from the ER to the vacuole. Mutant seed cell accumulates the precursors of 12S globulin and 2S albumin instead of the vacuolar-located mature proteins. C.G. S.X.
0.02 2e+0 34 At5g23350 832399 GRAM domain-containing protein / ABA-responsive protein-related F:unknown;P:biological_process unknown;C:unknown;P C.G. S.X.
0.02 2e+0 34 At5g23370 832401 GRAM domain-containing protein / ABA-responsive protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.02 2e+0 34 At5g23360 832400 GRAM domain-containing protein / ABA-responsive protein-related F:unknown;P:biological_process unknown;C:unknown;P C.G. S.X.
0.01 2e+0 34 At5g61820 836304 - F:molecular_function unknown;P:biological_process unknown;C:vacuole;PO C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 3e-15 83 Glycine max Gma.5513.1.S1_at AW310453 - - 3e-15 At5g02230 haloacid dehalogenase-like hydrolase family protein C.G. S.X.
0.08 2e-1 36 Hordeum vulgare Contig6491_at Contig6491 - - 6e-1 At5g02230 haloacid dehalogenase-like hydrolase family protein C.G. S.X.
0.03 8e-1 36 Oryza sativa Os01g0973000 NM_189475.1 - Pyrimidine 5-nucleotidase family protein 1e-1 At5g59490 haloacid dehalogenase-like hydrolase family protein C.G. S.X.
0.09 7e-10 65 Populus trichocarpa PtpAffx.2655.3.S1_a_at CN524159 hypothetical protein - 4e-10 At5g02230 haloacid dehalogenase-like hydrolase family protein C.G. S.X.
0.06 2e-6 54 Triticum aestivum Ta.14491.1.S1_at BJ287158 - - 3e-6 At5g02230 haloacid dehalogenase-like hydrolase family protein C.G. S.X.
0.17 9e-12 69 Vitis vinifera 1616302_at CB912509 ripening-related protein-like - 4e-11 At5g02230 haloacid dehalogenase-like hydrolase family protein C.G. S.X.
0.06 4e-2 38 Zea mays Zm.8941.1.A1_at BM334004 hypothetical protein LOC100273259 - 2e-1 At5g02230 haloacid dehalogenase-like hydrolase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0008152 The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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