Gene omics information

Query gene ID At5g01560
Gene name LECRKA4.3 (LECTIN RECEPTOR KINASE A4.3)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7385.5At5g01560830345LECRKA4.3 (LECTIN RECEPTOR KINASE A4.3)Encodes LecRKA4.3, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination.S.X.H.G.
0.8592.4At2g37430818319zinc finger (C2H2 type) family protein (ZAT11)F:transcription factor activity, zinc ion binding, nucleic acid binding;P:response to chitin, regulation of transcription;C:intracellular;MPOFS.X.H.G.
0.7989.1At1g14540838016anionic peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMS.X.H.G.
0.7989.1At2g27310817274F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.7788.0At1g69930843329ATGSTU11 (GLUTATHIONE S-TRANSFERASE TAU 11)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).S.X.H.G.
0.7687.4At5g24110832476WRKY30member of WRKY Transcription Factor; Group IIIS.X.H.G.
0.7687.4At2g32140817773transmembrane receptorF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane, chloroplast;PBOS.X.H.G.
0.7586.9At1g30370839917lipase class 3 family proteinF:triacylglycerol lipase activity;P:lipid metabolic process;C:unknown;PBOFMVS.X.H.G.
0.7284.8At3g23220821900DNA binding / transcription factorencodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.S.X.H.G.
0.6882.2At2g22760816806basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFOMAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
580.2100.0E-MEXP-807-raw-cel-1173273252
561.4100.0E-MEXP-807-raw-cel-1173273144
403.3100.0E-MEXP-807-raw-cel-1173273170
260.3100.0E-MEXP-807-raw-cel-1173273116
257.0100.0E-MEXP-807-raw-cel-1173273060
160.999.9E-MEXP-807-raw-cel-1173273223
98.199.9GSM39198RRE1_Chitin4GSE2169rre1 and rre2 mutants
73.599.9E-MEXP-807-raw-cel-1173273088
62.499.8GSM39197RRE1_Chitin3GSE2169rre1 and rre2 mutants
57.099.8GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.540732At5g01540831722LECRKA4.1 (LECTIN RECEPTOR KINASE A4.1)Encodes LecRKA4.1, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination.C.G.S.X.
0.560674At5g01550831700LECRKA4.2 (LECTIN RECEPTOR KINASE A4.1)Encodes LecRKA4.2, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination.C.G.S.X.
0.341e-64248At3g08870820035lectin protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.033e-757At3g53810824548lectin protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.031e-346At2g37710818348RLK (receptor lectin kinase)Induced in response to Salicylic acid.C.G.S.X.
0.017e-240At5g02070831776protein kinase-relatedF:kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVAC.G.S.X.
0.027e-240At4g02410828032lectin protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.013e-138At4g19820827726glycosyl hydrolase family 18 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, chitinase activity, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;MBFOVPAC.G.S.X.
0.013e-138At3g49370824099calcium-dependent protein kinase, putative / CDPK, putativeF:in 6 functions;P:N-terminal protein myristoylation;C:plasma membrane;MOPFBVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e-138Glycine maxGmaAffx.20815.1.S1_atAW132390--2e-1At1g17080unknown proteinC.G.S.X.
0.035e-136Hordeum vulgareContig13747_atContig13747--3e-2At5g59270lectin protein kinase family proteinC.G.S.X.
0.021e-140Oryza sativaOsAffx.28252.1.S1_at---0C.G.S.X.
0.034e-138Populus trichocarpaPtpAffx.224445.1.S1_s_atpmrna42995hypothetical protein-8e-12At5g59260lectin protein kinase, putativeC.G.S.X.
0.023e-138Triticum aestivumTaAffx.92064.1.S1_atBJ282294--1e-1At4g27540PRA1.H (PRENYLATED RAB ACCEPTOR 1.H)C.G.S.X.
0.022e-240Vitis vinifera1612334_atCB970779hypothetical protein LOC100253895-4e-6At5g36160aminotransferase-relatedC.G.S.X.
0.012e+034Zea maysZm.7025.1.A1_atCF047868hypothetical protein LOC100274924-2e-14At5g02502unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009738A series of molecular signals mediated by the detection of abscisic acid.
XGO:0009845The physiological and developmental changes that occur in a seed commencing with water uptake (imbibition) and terminating with the elongation of the embryonic axis.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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