Gene omics information

Query gene ID At5g01520
Gene name zinc finger (C3HC4-type RING finger) family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3338.1At5g01520831747zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MOPVFS.X.H.G.
0.8089.8At2g46680819280ATHB-7 (ARABIDOPSIS THALIANA HOMEOBOX 7)encodes a putative transcription factor that contains a homeodomain closely linked to a leucine zipper motif. Transcript is detected in all tissues examined. Is transcriptionally regulated in an ABA-dependent manner and may act in a signal transduction pathway which mediates a drought response.S.X.H.G.
0.8089.8At3g61890825362ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX 12)Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. Loss of function mutant has abnormally shaped leaves and stems.S.X.H.G.
0.7586.9At5g57050835809ABI2 (ABA INSENSITIVE 2)Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo.S.X.H.G.
0.6781.6At2g41190818718amino acid transporter family proteinF:amino acid transmembrane transporter activity;P:amino acid transport;C:plasma membrane, membrane;MPOFBAVS.X.H.G.
0.6781.6At5g59220836040protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:response to water deprivation, response to abscisic acid stimulus;C:chloroplast;MPOFBVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
151.099.9GSM269821WT leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
91.699.9GSM131607ATGE_42_CGSE5632AtGenExpress: Developmental series (flowers and pollen)
84.299.9GSM131608ATGE_42_DGSE5632AtGenExpress: Developmental series (flowers and pollen)
84.099.9E-ATMX-30-raw-cel-1513696906
83.499.9GSM131303AtGen_6-2611_Osmoticstress-Shoots-24.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
83.299.9GSM131606ATGE_42_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
68.999.9GSM269827C2 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
65.999.8GSM269819C2 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
58.899.8GSM38670DSNPGSE2268Arabidopsis polysome microarray
52.299.8GSM269813WT leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.266e-652At5g58787835995zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOVFC.G.S.X.
0.052e-550At1g13195837878zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MPOVFC.G.S.X.
0.071e-344At3g47160823869protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:unknown;C:unknown;MPOVFC.G.S.X.
0.029e-238At4g18090827534unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPC.G.S.X.
0.034e-136At4g14450827090unknown proteinF:unknown;P:unknown;C:chloroplast;PC.G.S.X.
0.024e-136At4g37610829915BT5 (BTB AND TAZ DOMAIN PROTEIN 5)BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.369e-1581Glycine maxGmaAffx.60268.1.S1_atBM732712--4e-15At5g01520zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.062e-136Hordeum vulgareContig7395_atContig7395--7e-1At5g01520zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.117e-446Oryza sativaOs04g0679800AK060662.1-RNA-binding protein-like protein6e-4At5g01520zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.273e-21103Populus trichocarpaPtpAffx.213622.1.S1_atpmrna26602hypothetical protein-3e-18At5g58787zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.054e-136Triticum aestivumTa.3452.3.S1_a_atBJ211852--3e-1At5g01520zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.097e-340Vitis vinifera1622027_atCA814069hypothetical protein LOC100246837-6e-7At3g47160protein binding / zinc ion bindingC.G.S.X.
0.064e-238Zea maysZm.5210.1.A1_atAY105141.1IDP2492 protein-7e-4At3g47160protein binding / zinc ion bindingC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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