Gene omics information

Query gene ID At5g01300
Gene name phosphatidylethanolamine-binding family protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At5g01300830983phosphatidylethanolamine-binding family proteinF:phosphatidylethanolamine binding;P:biological_process unknown;C:cellular_component unknown;BOAPFS.X.H.G.
0.9095.1At5g22470832308NAD+ ADP-ribosyltransferaseF:NAD+ ADP-ribosyltransferase activity;P:protein amino acid ADP-ribosylation;C:intracellular, nucleus;MOPFBVS.X.H.G.
0.8894.0At3g17520821017late embryogenesis abundant domain-containing protein / LEA domain-containing proteinF:unknown;P:embryonic development ending in seed dormancy;C:endomembrane system;MOBFPVAS.X.H.G.
0.8894.0At2g25890817130glycine-rich protein / oleosinF:molecular_function unknown;P:lipid storage;C:monolayer-surrounded lipid storage body, integral to membrane, membrane;PBS.X.H.G.
0.8894.0At2g21820816718unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8894.0At3g50980824262XERO1 (DEHYDRIN XERO 1)F:molecular_function unknown;P:response to water, response to stress;C:cellular_component unknown;PMS.X.H.G.
0.8793.5At3g12960820482unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.8793.5At1g54870841926binding / catalytic/ oxidoreductaseF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:chloroplast;BOMFPAVS.X.H.G.
0.8693.1At3g11050820276ATFER2 (ferritin 2)F:oxidoreductase activity, ferric iron binding, binding, transition metal ion binding;P:response to oxidative stress, cellular iron ion homeostasis, response to abscisic acid stimulus, iron ion transport;C:chloroplast;MBPOAFS.X.H.G.
0.8693.1At4g21020827849late embryogenesis abundant domain-containing protein / LEA domain-containing proteinF:unknown;P:embryonic development ending in seed dormancy;C:unknown;OMBPFVAS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
281.4100.0GSM131700ATGE_82_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
235.7100.0GSM131703ATGE_83_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
227.7100.0GSM131708ATGE_84_DGSE5634AtGenExpress: Developmental series (siliques and seeds)
219.3100.0GSM131706ATGE_84_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
215.7100.0GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibition
215.4100.0GSM131701ATGE_82_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
204.6100.0GSM133117RIKEN-YAMAUCHI1AGSE5687AtGenExpress: Different temperature treatment of seeds
202.8100.0GSM131702ATGE_82_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
201.6100.0GSM131705ATGE_83_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
200.0100.0GSM131704ATGE_83_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.036e-238At3g56090824775ATFER3 (ferritin 3)Encodes FERRITIN 3, AtFER3. Ferritins are a class of 24-mer multi-meric proteins found in all kingdoms of life. Function as the main iron store in mammals. Evidence suggests that Arabidopsis ferritins are essential to protect cells against oxidative damage, but they do not constitute the major iron pool.C.G.S.X.
0.049e-134At5g02420831836unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.029e-134At5g65640836690bHLH093 (beta HLH protein 93)F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOC.G.S.X.
0.019e-134At3g10380820201SEC8 (SUBUNIT OF EXOCYST COMPLEX 8)Subunit of the Putative Arabidopsis Exocyst ComplexC.G.S.X.
0.019e-134At3g47340823888ASN1 (GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1)encodes a glutamine-dependent asparagine synthetase, the predicted ASN1 peptide contains a purF-type glutamine-binding domain, and is expressed predominantly in shoot tissues, where light has a negative effect on its mRNA accumulation. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.C.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+034Glycine maxGmaAffx.90444.1.S1_s_atCF806169--1e-24At3g27890NQR (NADPH:QUINONE OXIDOREDUCTASE)C.G.S.X.
0.037e+030Hordeum vulgareHU05K13u_atHU05K13u--3e-1At2g34560katanin, putativeC.G.S.X.
0.035e-136Oryza sativaOsAffx.12690.1.S1_at---0C.G.S.X.
0.095e-342Populus trichocarpaPtpAffx.213644.1.S1_atpmrna26651hypothetical protein-4e-3At5g01300phosphatidylethanolamine-binding family proteinC.G.S.X.
0.044e+032Triticum aestivumTaAffx.51592.1.S1_atCA723245--2e+0At5g01300phosphatidylethanolamine-binding family proteinC.G.S.X.
0.041e+032Vitis vinifera1612996_atCD798919--5e-2At4g11600ATGPX6 (GLUTATHIONE PEROXIDASE 6)C.G.S.X.
0.032e+032Zea maysZm.3114.1.A1_atCK827106low-molecular-weight cysteine-rich protein LCR70-6e+0At5g01300phosphatidylethanolamine-binding family proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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