Gene omics information

Query gene ID At4g39830
Gene name L-ascorbate oxidase, putative
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7586.9At4g39830830142L-ascorbate oxidase, putativeF:oxidoreductase activity, L-ascorbate oxidase activity, copper ion binding;P:oxidation reduction;C:endomembrane system, extracellular region;BFPMOAS.X.H.G.
0.6277.3At4g39640830118GGT1 (GAMMA-GLUTAMYL TRANSPEPTIDASE 1)The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC that is located in vascular tissues (predominantly phloem) of leaves and is involved in the degradation of glutathione. The encoded enzyme also mitigates oxidative stress by metabolizing GSSG (oxidized form of GSH - glutathione) in the apoplast.S.X.H.G.
0.6176.7At4g33050829442EDA39 (embryo sac development arrest 39)F:calmodulin binding;P:polar nucleus fusion, response to chitin;C:cellular_component unknown;PFOS.X.H.G.
0.6176.7At3g52400824405SYP122 (SYNTAXIN OF PLANTS 122)syntaxin protein, involved in the negative regulation of defense pathways such as programmed cell death, salicylic acid signalling pathway, jasmonic acid signalling pathwayS.X.H.G.
0.5773.8At1g01560839523ATMPK11member of MAP KinaseS.X.H.G.
0.5673.0At4g14365827080zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MOBFPVAS.X.H.G.
0.5673.0At5g39670833963calcium-binding EF hand family proteinF:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MPFOBS.X.H.G.
0.5469.5At5g4854083491033 kDa secretory protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.5469.5At1g29690839846CAD1 (constitutively activated cell death 1)Encodes a protein containing a domain with significant homology to the MACPF (membrane attack complex and perforin) domain of complements and perforin proteins that are involved in innate immunity in animals. Transgenic cad1-1 mutant plants show lesions seen in the hypersensitive response, as well as a spontaneous activation of expression of pathogenesis-related genes and leading to a 32-fold increase in salicylic acid (SA). CAD1 is postulated to act as a negative regulator controlling SA-mediated pathway of programmed cell death in plant immunity.S.X.H.G.
0.5469.5At5g35735833550auxin-responsive family proteinF:unknown;P:unknown;C:plasma membrane, membrane;PMFOBS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
137.399.9GSM131322AtGen_6-3422_Saltstress-Roots-6.0h_Rep2GSE5623AtGenExpress: Stress Treatments (Salt stress)
90.599.9GSM131321AtGen_6-3421_Saltstress-Roots-6.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
84.099.9GSM131325AtGen_6-3521_Saltstress-Roots-12.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
79.899.9GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
79.499.9GSM133945Murray_2-1_T0-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studies
73.599.9GSM131329AtGen_6-3621_Saltstress-Roots-24.0h_Rep1GSE5623AtGenExpress: Stress Treatments (Salt stress)
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.071e-346At5g21105832235L-ascorbate oxidase/ copper ion binding / oxidoreductaseF:oxidoreductase activity, L-ascorbate oxidase activity, copper ion binding;P:oxidation reduction;C:cell wall;BFPMOAC.G.S.X.
0.019e-136At4g00490827959BAM2 (BETA-AMYLASE 2)Encodes a chloroplast beta-amylase. The enzyme activity is very weak compared to BAM1 and BAM3. Mutant of BAM2 has no visible phenotype.C.G.S.X.
0.019e-136At4g26130828719unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOFC.G.S.X.
0.019e-136At1g20060838594ATP binding / microtubule motorF:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex, chloroplast;MOFPBAVC.G.S.X.
0.013e+034At5g23730832438nucleotide bindingF:nucleotide binding;P:unknown;C:CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex;MFBOPAC.G.S.X.
0.033e+034At5g21100832234L-ascorbate oxidase, putativeF:oxidoreductase activity, copper ion binding, L-ascorbate oxidase activity;P:oxidation reduction;C:plant-type cell wall;BFPMOAC.G.S.X.
0.013e+034At5g20540832176ATBRXL4 (BREVIS RADIX-LIKE 4)Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity.C.G.S.X.
0.013e+034At5g49730835036ATFRO6 (FERRIC REDUCTION OXIDASE 6)Encodes a plasma membrane-located ferric chelate reductase. Its mRNA is expressed in green aerial tissues (shoot, flower and cotyledon) in a light- and cell differentiation-specific manner.C.G.S.X.
0.013e+034At5g49740835037ATFRO7 (FERRIC REDUCTION OXIDASE 7)Encodes a chloroplast ferric chelate reductase. Shows differential splicing and has three different mRNA products. Expressed in the shoot, flower and cotyledon.C.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.205e-344Glycine maxGma.8447.1.S1_atAB083032.1syringolide-induced protein B13-1-1-4e-3At4g39830L-ascorbate oxidase, putativeC.G.S.X.
0.034e-136Hordeum vulgareContig16758_atContig16758--5e-1At4g39830L-ascorbate oxidase, putativeC.G.S.X.
0.017e+034Oryza sativaOsAffx.23163.1.A1_at---0C.G.S.X.
0.122e-242Populus trichocarpaPtp.3277.1.S1_atDN498720hypothetical protein-1e-2At4g39830L-ascorbate oxidase, putativeC.G.S.X.
0.034e-344Triticum aestivumTa.27566.1.S1_atBT008984.1--2e-8At5g21105L-ascorbate oxidase/ copper ion binding / oxidoreductaseC.G.S.X.
0.037e-857Vitis vinifera1607223_atBQ796376hypothetical protein LOC100251280-4e-14At5g21105L-ascorbate oxidase/ copper ion binding / oxidoreductaseC.G.S.X.
0.016e+032Zea maysZm.7385.1.A1_atCF626198--7e+0At5g19473-C.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0055114The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

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