Gene omics information

Query gene ID At4g39320
Gene name microtubule-associated protein-related
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4457.2At4g39320830087microtubule-associated protein-relatedF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOFBPS.X.H.G.
0.6176.7At1g03820839400unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OPFMBS.X.H.G.
0.4050.8At2g01610814690invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.4050.8At3g27400822361pectate lyase family proteinF:pectate lyase activity;P:biological_process unknown;C:endomembrane system;BPFOS.X.H.G.
0.2217.5At2g35150818081EXL1 (EXORDIUM LIKE 1)F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
738.7100.0GSM134208Murray_3-4_D7-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cells
444.6100.0GSM270853Arabidopsis cell culture, 4 h_control_rep2GSE10719Response of Arabidopsis cell culture to phytoprostane A1
283.3100.0GSM270814Arabidopsis cell culture, 4 h_control_rep1GSE10719Response of Arabidopsis cell culture to phytoprostane A1
140.899.9GSM133945Murray_2-1_T0-APH_Rep1_ATH1GSE5747Genome-wide cell cycle studies
131.399.9GSM134202Murray_3-1_D1-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cells
120.699.9GSM134204Murray_3-2_D3-GROWTH_Rep1_ATH1GSE5750Growth of suspension-cultured cells
84.799.9GSM131660ATGE_28_C2GSE5633AtGenExpress: Developmental series (shoots and stems)
84.499.9GSM131658ATGE_28_A2GSE5633AtGenExpress: Developmental series (shoots and stems)
83.399.9GSM131659ATGE_28_B2GSE5633AtGenExpress: Developmental series (shoots and stems)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.012e-240At2g31910817749ATCHX21 (CATION/H+ EXCHANGER 21)member of Putative Na+/H+ antiporter familyC.G.S.X.
0.032e-136At4g35550829707WOX13 (WUSCHEL-RELATED HOMEOBOX 13)Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. WOX13 is the only family member that does not contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box.C.G.S.X.
0.042e-136At4g19200827660proline-rich family proteinF:unknown;P:unknown;C:unknown;MBPFOVAC.G.S.X.
0.012e-136At3g46790823832CRR2 (CHLORORESPIRATORY REDUCTION 2)Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-H subfamily) with 9 pentatricopeptide (PPR) repeats. The protein is involved the intergenic processing of chloroplast RNA between rps7 and ndhB, which is essential for ndhB translation.C.G.S.X.
0.012e-136At2g04620815004cation efflux family proteinF:cation transmembrane transporter activity, efflux transmembrane transporter activity;P:cation transport;C:membrane;OBMFPAVC.G.S.X.
0.022e-136At1g53500841785MUM4 (MUCILAGE-MODIFIED 4)encodes a putative NDP-L-rhamnose synthase, an enzyme required for the synthesis of the pectin rhamnogalacturonan I, the major component of Arabidopsis mucilage. Gene is involved in seed coat mucilage cell development. Mutant analyses suggest that MUM4 is required for complete mucilage synthesis, cytoplasmic rearrangement and seed coat development.C.G.S.X.
0.031e+034At5g48290834882heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;POBFC.G.S.X.
0.021e+034At5g09550830814RAB GDP-dissociation inhibitorF:RAB GDP-dissociation inhibitor activity;P:regulation of GTPase activity, protein transport;C:cellular_component unknown;MFOPBC.G.S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.045e+032Glycine maxPsAffx.psZG004xF17f_atPsAffx.psZG004xF17f--6e-1At5g64800CLE21 (CLAVATA3/ESR-RELATED 21)C.G.S.X.
0.032e+032Hordeum vulgareContig20160_atContig20160--8e-2At3g59740receptor lectin kinase 3 (lecRK3)C.G.S.X.
0.052e+034Oryza sativaOs07g06063669635.m04157--7e-1At4g39320microtubule-associated protein-relatedC.G.S.X.
0.043e-136Populus trichocarpaPtpAffx.220183.1.S1_atpmrna36538hypothetical protein-4e+0At5g2451060s acidic ribosomal protein P1, putativeC.G.S.X.
0.034e+032Triticum aestivumTaAffx.85900.1.S1_atCA618602--3e-1At1g31750proline-rich family proteinC.G.S.X.
0.033e-134Vitis vinifera1617408_atCB003255--9e-8At4g12830hydrolase, alpha/beta fold family proteinC.G.S.X.
0.034e-134Zea maysZm.8677.1.A1_atCO531412structural constituent of ribosome-2e-1At3g26147unknown proteinC.G.S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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